Gene detail information of Glyur000068s00006871 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| trEMBL | tr|A0A097GTY5|A0A097GTY5_PHALU | 6.00E-06 | Jasmonate ZIM domain-containing protein {ECO:0000313|EMBL:AIT38273.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00068 | 369694 | 370042 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.355 |
| SRR1783600 | control | 3.931 |
| SRR1783602 | moderate drought stress | 4.178 |
| SRR1811619 | moderate drought stress | 2.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.723 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.113 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.339 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.181 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.128 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.494 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.369 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.033 |
| SRR2868004 | Drought Stress (root) | 3.955 |
| SRR2967015 | Control (root) | 4.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.848 |
| SRR9715740 | Leaf | 1.754 |
| SRR9715741 | Leaf | 0.915 |
| SRR9715739 | Root | 0.068 |
| SRR9715742 | Root | 1.696 |
| SRR9715743 | Root | 0.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.334 |
| SRR8749028 | MeJA induced 9h | 4.049 |
| SRR8749029 | MeJA induced 9h | 3.987 |
| SRR8749030 | Uninduced | 0.915 |
| SRR8749031 | Uninduced | 1.473 |
| SRR8749032 | Uninduced | 1.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.627 |
| SRR8400027 | Control - Root | 7.257 |