Gene detail information of Glyur000068s00006857 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27180.1 | 2.00E-05 | |
| NR | XP_004506249.1 | 5.87E-30 | PREDICTED: uncharacterized protein LOC101514172 [Cicer arietinum] |
| trEMBL | tr|I1M466|I1M466_SOYBN | 1.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G38710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00068 | 285826 | 286227 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.941 |
| SRR1783600 | control | 1.925 |
| SRR1783602 | moderate drought stress | 3.518 |
| SRR1811619 | moderate drought stress | 3.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.271 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.775 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.577 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.609 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.511 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.170 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.584 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.124 |
| SRR2868004 | Drought Stress (root) | 12.212 |
| SRR2967015 | Control (root) | 17.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 38.441 |
| SRR9715740 | Leaf | 24.484 |
| SRR9715741 | Leaf | 46.739 |
| SRR9715739 | Root | 65.438 |
| SRR9715742 | Root | 42.246 |
| SRR9715743 | Root | 43.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.444 |
| SRR8749028 | MeJA induced 9h | 15.477 |
| SRR8749029 | MeJA induced 9h | 19.320 |
| SRR8749030 | Uninduced | 4.413 |
| SRR8749031 | Uninduced | 7.907 |
| SRR8749032 | Uninduced | 28.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.023 |
| SRR8400027 | Control - Root | 6.731 |