Gene detail information of Glyur000068s00006846 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21100.1 | 1.00E-17 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | XP_004506278.1 | 4.91E-77 | PREDICTED: disease resistance response protein 206-like [Cicer arietinum] |
| Swissprot | tr|Q84TH6|DIR23_ARATH | 7.00E-21 | Dirigent protein 23 (Precursor) |
| trEMBL | tr|I1LRP2|I1LRP2_SOYBN | 5.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G10390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00068 | 207900 | 208388 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000068s00006846.1 | PF03018.9 | Dirigent | 16 | 159 | 5.20E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.299 |
| SRR1783600 | control | 0.225 |
| SRR1783602 | moderate drought stress | 0.297 |
| SRR1811619 | moderate drought stress | 0.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.382 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.440 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.074 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.449 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.513 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.245 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.379 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.093 |
| SRR9715740 | Leaf | 0.142 |
| SRR9715741 | Leaf | 0.384 |
| SRR9715739 | Root | 1.521 |
| SRR9715742 | Root | 1.022 |
| SRR9715743 | Root | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.215 |
| SRR8749028 | MeJA induced 9h | 2.599 |
| SRR8749029 | MeJA induced 9h | 7.268 |
| SRR8749030 | Uninduced | 14.108 |
| SRR8749031 | Uninduced | 8.152 |
| SRR8749032 | Uninduced | 14.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.592 |
| SRR8400027 | Control - Root | 0.263 |