Gene detail information of Glyur000068s00006834 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G11740.1 | 5.00E-04 | ankyrin repeat family protein |
| NR | ACJ86137.1 | 5.64E-38 | unknown [Medicago truncatula] |
| trEMBL | tr|B7FN04|B7FN04_MEDTR | 2.00E-38 | Uncharacterized protein {ECO:0000313|EMBL:AFK33574.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00068 | 158014 | 159449 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.225 |
| SRR1783600 | control | 18.374 |
| SRR1783602 | moderate drought stress | 22.399 |
| SRR1811619 | moderate drought stress | 22.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.795 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.892 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 86.349 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 90.997 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 42.316 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 45.169 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.735 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 176.200 |
| SRR2868004 | Drought Stress (root) | 243.600 |
| SRR2967015 | Control (root) | 223.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 55.545 |
| SRR9715740 | Leaf | 53.852 |
| SRR9715741 | Leaf | 68.157 |
| SRR9715739 | Root | 53.838 |
| SRR9715742 | Root | 30.124 |
| SRR9715743 | Root | 38.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 86.933 |
| SRR8749028 | MeJA induced 9h | 55.148 |
| SRR8749029 | MeJA induced 9h | 82.273 |
| SRR8749030 | Uninduced | 76.088 |
| SRR8749031 | Uninduced | 49.680 |
| SRR8749032 | Uninduced | 123.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 61.181 |
| SRR8400027 | Control - Root | 57.828 |