Gene detail

Gene detail information of Glyur000067s00006409

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G18030.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NR	XP_003524439.1	PREDICTED: probable methyltransferase PMT14-like isoform X1 [Glycine max]
Swissprot	tr\|Q94EJ6\|PMTE_ARATH	Probable methyltransferase PMT14
trEMBL	tr\|I1K108\|I1K108_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G06050.3}

Sequence

Transcript Sequence

>Glyur000067s00006409.1
GTGAGTTTATCCCTGATGAATGATGAGGACTTGTGTCGGCGGATAAATTCTACAGAAAGGGGGGTGAAATAGCCAACTTGATGCACTCCAACTGTCAAAAGTCGCCTTCTGTTCTGTTCTGTTCACTCACTTTCCCACTTAGCTTGCTGCTGTCTCTCTTTTGAGTGATCTAGATCAGTGGGGTGATCTATAAGGAGAAAGAACCTCTTTTGGAGGTTTTACCGTTTGAAAGAATACTGCCAAGTCTGCCATCTGAATAATAATGGGTTCTAAAAATAACCCACCAGGCCACAGAGCAAGAAGGCCTTTGTCAATATTTGCTGTGCTTGGTCTGTGTTGTTTCTTTTATCTTTTGGGGGCATGGCAAAGAAGTGGGTCTGGAAAGGGAGATAACCTTGCATTGAAAGTGAATAAGCTGATGACAGACTGCAATGTTGGACCCAATTTGAGTTTTGAGTCCCATCACAATATTGTAGAGCTTGTTGAACCTTCTGAACCGAAAGGCAAAGTGTTCAAGCCGTGCGATTTAAAATATACCGATTATACGCCTTGCCAAGAGCAAGACCGAGCCATGACATTCACAAGGGAGAACATGATCTATAGGGAAAGGCATTGTCCACCTGAAGAGGAAAAATTGCACTGCCTCATTCCTGCCCCGCAAGGGTACACCACTCCTTTTCCCTGGCCTAAAAGCCGTGACTATGCATATTATGCTAATGTTCCTTACAAGAGCTTGACAGTGGAGAAGGCTGTTCAAAACTGGGTGCAATACCAGGGTAATGTGTTTAAATTTCCAGGTGGAGGGACCATGTTCCCTCAAGGAGCAGATGCATATATTGATGAACTTGCATCNGTTATTCCGATTGCAGATGGTTCTGTCAGAACAGCACTGGACACTGGTTGTGGGGATAACCACGAAGCACAAGTTCAGTTTGCACTAGAGCGAGGGGTACCTGCTGTTATTGGTGTTCTTGGTACCATCCGTCTTCCATATCCATCAAGAGCCTTTGATATGGCCCAGTGTTCTCGATGTCTAATACCGTGGACTTCAAATGAGGGCATGTATCTAATGGAAGTTGATCGAGTCTTAAGGCCTGGTGGATACTGGATTTTGTCTGGCCCTCCAATTAATTGGAAAACATACTATCAAACATGGAAGCGATCCAAGGAGGAACTGAAGGCAGAGCAGAGAAAAATTGAGGAGTTAGCTGAAAGTCTTTGCTGGGAAAAGAAGTATGAAAAGGGTGATATTGCTATTTGGAGGAAGAAAATAAATGCTAAATCCTGTCAAAGAAAGTCTCCCAATTTATGTGATTCAGATAATGCTGATGATGTATGGTACAAAAAAATGGAGGTCTGTAAAACTCCTATCCCTGAGGTAACCAGCAAAAGTGAAGTTGCTGGAGGGGAATTGAAGAAGTTTCCTGCTAGACTTTTTGCAGTCCCTCCTCGAATAGCTAAGGGCATTATTCCAGGCGTTACANCAGAATCTTATCAAGAGGACAACAAATTATGGAAAAAGCATGTTAATGCTTACAAGAGAATGAATAGACTGATTGGCACTACTAGATATCGGAATNTGATGGACATGAATGCAGGCCTCGGTGGATTTGCGGCTGCACTCGAATCAAAAAAATCTTGGGTGATGAATGTTGTGCCCACGATTGCTAAGAACACTTTAGGTGTTGTCTATGAAAGAGGTCTGATTGGCATTTACCATGACTGGTGTGAAGGCTTTTCTACATACCCGAGGACATATGATCTTATTCATGCTAATGGTTTATTTAGTTTGTACCAGGACACGTGCAACCTAGAAGACATCCTTCTAGAGATGGATCGCATTCTACGGCCTGAGGGAGCAATCATCATCCGGGATGAAGTTGATGTCCTTAACAAGGTTAAGAACANTGTTGGGGGAATGAGATGGGATGCTAAACTGGTGGATCATGAGGATGGCCCACTTGTTCCTGAGAAGATATTGGTTGCTGTAAAAGAGTATTGGGTTGGNAGCAGTAAAAACAACACCTCCAATTAAGGACTAAAAATCAGGTATTGTGTTTAACTCAGCAATNCTGAAACAATCAAGGTAGGTTTCTAAACTCAAAGCAAAGAAGAAATGGAAACAGATGATAAATGAAATTGAAAGAGAAGAGAAGATATTGTAGAGCCAAGTACAAGCAAAGATTGGTTANGTGAGCTTTTATTCTACGTCTGCCTTTTACCAAGTGTAGAACTGTAGATAAATTTAGTCCTAACTTGTCTNCTTCTTGAATTGATTTTGGAGGATATAGATCAGCAAGATTGGATCCCCAAATAAATTAAGCCAAAGATACTGGGTTGATGTTGAGACATAAGTACTCATGATGTCAGAATATTGAAATATTGCAATTATATTCAGTTCGTTATTTAAAATAAATGTTTGTGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00067	410426	415773	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008168 methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000067s00006409.1	PF03141.11	Methyltransf_29	216	577	4.00E-159

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	61.167
SRR1783600	control	60.968
SRR1783602	moderate drought stress	53.296
SRR1811619	moderate drought stress	52.568

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	68.302
DRR006520	Root Summer glycyrrhizin high producing strain	67.352
DRR006521	Root Winter glycyrrhizin high producing strain	16.571
DRR006522	Root Winter glycyrrhizin high producing strain	16.304
DRR006523	Root Summer glycyrrhizin low producing strain	55.885
DRR006524	Root Summer glycyrrhizin low producing strain	55.460
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.401
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.638

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	95.168
SRR2868004	Drought Stress (root)	57.272
SRR2967015	Control (root)	63.420

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	27.228
SRR9715740	Leaf	20.271
SRR9715741	Leaf	21.676
SRR9715739	Root	9.898
SRR9715742	Root	52.505
SRR9715743	Root	48.356

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	58.163
SRR8749028	MeJA induced 9h	44.100
SRR8749029	MeJA induced 9h	35.068
SRR8749030	Uninduced	3.810
SRR8749031	Uninduced	0.874
SRR8749032	Uninduced	2.748

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	79.658
SRR8400027	Control - Root	99.974