Gene detail information of Glyur000067s00006401


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G44610.12.00E-108Ras-related small GTP-binding family protein
NRXP_004508989.16.99E-146PREDICTED: ras-related protein RABH1b-like [Cicer arietinum]
COGYP_004465499.14.00E-19small GTP-binding protein [Alteromonas sp. SN2]
Swissprottr|O80501|RAH1B_ARATH1.00E-137Ras-related protein RABH1b
trEMBLtr|A0A072UNZ7|A0A072UNZ7_MEDTR5.00E-145RAB GTPase-like protein B1C {ECO:0000313|EMBL:KEH31569.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00067373455377074+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0006886  intracellular protein transport

GO:0006913  nucleocytoplasmic transport

GO:0007165  signal transduction

GO:0007264  small GTPase mediated signal transduction

GO:0015031  protein transport


cellular_component

GO:0005622  intracellular

GO:0016020  membrane


molecular_function

GO:0003924  GTPase activity

GO:0005525  GTP binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000067s00006401.1PF00071.17Ras111701.80E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.922
SRR1783600control22.324
SRR1783602moderate drought stress16.234
SRR1811619moderate drought stress16.336

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain62.859
DRR006520Root Summer glycyrrhizin high producing strain62.081
DRR006521Root Winter glycyrrhizin high producing strain105.158
DRR006522Root Winter glycyrrhizin high producing strain105.262
DRR006523Root Summer glycyrrhizin low producing strain34.801
DRR006524Root Summer glycyrrhizin low producing strain35.404
DRR006525Leaf Summer glycyrrhizin high producing strain10.800
DRR006526Leaf Summer glycyrrhizin high producing strain11.637

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)115.054
SRR2868004Drought Stress (root)78.289
SRR2967015Control (root)108.218

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf13.513
SRR9715740Leaf10.869
SRR9715741Leaf13.139
SRR9715739Root6.416
SRR9715742Root21.834
SRR9715743Root19.863

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.389
SRR8749028MeJA induced 9h26.298
SRR8749029MeJA induced 9h32.856
SRR8749030Uninduced39.744
SRR8749031Uninduced20.270
SRR8749032Uninduced19.019

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root54.802
SRR8400027Control - Root56.923