Gene detail information of Glyur000067s00006398 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67150.1 | 2.00E-15 | HXXXD-type acyl-transferase family protein |
| NR | XP_004509128.1 | 1.49E-48 | PREDICTED: uncharacterized acetyltransferase At3g50280-like [Cicer arietinum] |
| Swissprot | tr|Q9SND9|Y3028_ARATH | 3.00E-18 | Uncharacterized acetyltransferase At3g50280 |
| trEMBL | tr|C6T161|C6T161_SOYBN | 1.00E-43 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU15278.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00067 | 358457 | 358957 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000067s00006398.1 | PF02458.10 | Transferase | 4 | 137 | 5.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.623 |
| SRR1783600 | control | 5.462 |
| SRR1783602 | moderate drought stress | 5.769 |
| SRR1811619 | moderate drought stress | 5.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.370 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.927 |
| SRR2868004 | Drought Stress (root) | 10.169 |
| SRR2967015 | Control (root) | 11.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.033 |
| SRR9715740 | Leaf | 0.343 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 4.893 |
| SRR9715742 | Root | 3.054 |
| SRR9715743 | Root | 4.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.240 |
| SRR8749028 | MeJA induced 9h | 1.940 |
| SRR8749029 | MeJA induced 9h | 0.602 |
| SRR8749030 | Uninduced | 0.853 |
| SRR8749031 | Uninduced | 0.211 |
| SRR8749032 | Uninduced | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.576 |
| SRR8400027 | Control - Root | 4.459 |