Gene detail information of Glyur000067s00006394 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47060.1 | 8.00E-33 | Protein of unknown function (DUF581) |
| NR | AFK39199.1 | 1.39E-71 | unknown [Medicago truncatula] |
| trEMBL | tr|I1K0Z1|I1K0Z1_SOYBN | 4.00E-72 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G05800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00067 | 337366 | 339187 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000067s00006394.1 | PF04570.9 | DUF581 | 65 | 118 | 2.60E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 46.343 |
| SRR1783600 | control | 46.340 |
| SRR1783602 | moderate drought stress | 38.880 |
| SRR1811619 | moderate drought stress | 38.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 67.327 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 67.416 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 622.996 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 606.965 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.056 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.232 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.053 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.553 |
| SRR2868004 | Drought Stress (root) | 38.352 |
| SRR2967015 | Control (root) | 51.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.239 |
| SRR9715740 | Leaf | 8.149 |
| SRR9715741 | Leaf | 9.022 |
| SRR9715739 | Root | 7.570 |
| SRR9715742 | Root | 14.967 |
| SRR9715743 | Root | 15.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.179 |
| SRR8749028 | MeJA induced 9h | 62.807 |
| SRR8749029 | MeJA induced 9h | 35.212 |
| SRR8749030 | Uninduced | 2.356 |
| SRR8749031 | Uninduced | 1.761 |
| SRR8749032 | Uninduced | 3.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 60.692 |
| SRR8400027 | Control - Root | 73.800 |