Gene detail

Gene detail information of Glyur000067s00006386

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G47070.1	4.00E-134	Protein kinase superfamily protein
NR	XP_004508979.1	0	PREDICTED: probable receptor-like protein kinase At5g47070-like [Cicer arietinum]
COG	YP_002763344.1	2.00E-23	putative protein kinase [Gemmatimonas aurantiaca T-27]
Swissprot	tr\|Q9LTC0\|Y5707_ARATH	1.00E-165	Probable receptor-like protein kinase At5g47070
trEMBL	tr\|A0A072UQF6\|A0A072UQF6_MEDTR	0	Receptor-like kinase plant {ECO:0000313\|EMBL:KEH31591.1}

Sequence

Transcript Sequence

>Glyur000067s00006386.1
GGTTTGAAAGGTCCTCTTTTCTTGTTATCAAAAAAAAAAAGGGTCCTCTTTTCTTTTCTTCTCTTCTTCTTCCTCATGCGTTGCGTCCTCAACCCGCTCTCACTCCTGTCTCTGTCTCCATCCTCTCTCTCTCTTCTCCACGCGGCTCTGTGATTACTTCCGCATCCACTCCTTCTTGTTCCCACCCTGTTCATCATCATCTATTATCACCATTCACTTCATCTATTCTTCTTCTTCTTCTTCTTCTTATAAATATATAAAATTTACTGCAAGCTCCTATTTTTCTCATCTGGGGTTTCTCCTTCTCCAATCGCCTTCCACTTTTCGGACTCTCTCTTCGTTGGAACAACACATATTGGCAAACTTGATGATTTAGAAAATGAAGTGTTTCTTCTTCAAGGAGAAGTGCAAATCCGCACCAGAATTGCAGAACCAAAGCAAGAAGAAAAACCCCGCGTTGAACCGCGCAACCAACTCCACAGGCTCTGTGTCCTCTCCCAAGAGCGTGAAGGACCTTTACAAGGAGAAAGAGCACAATTTCAGGGTTTTCACTTTCCAAGAGCTGAGAGATGCTACCAACGGTTTCAATAGGACGCTGAAGCTCGGAGAAGGGGGTTTTGGGACTGTGTATAAAGGATCCATTATGGCCCAAGATGGACGAGGTGATCCAATTGTAGTTGCCATCAAAAGGCTTAACACGCGTGGCTTCCAGGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTCAATCACCCAAACTTGGTTAAGCTTTTGGGATACTGCTCCGTAGATGGAGAGAGAGGAATCCAACGGCTGTTGGTGTATGAGTTCATGCCAAACAGGAGCTTGGAAGACCACCTTTTCAGTAAAACTTTACCCCCACTGCCATGGATAACAAGATTGGAGATCATGCTCGGTGCTGCTCAAGGATTAGCTTATCTACACGAGGGGCTGGAGATACAGGTGATCTACCGAGATTTCAAATCTTCAAACGTTCTATTGGACACNGATTTCCACCCAAAGCTCTCAGATTTTGGTCTTGCTAGGGAAGGGCCACAAGGTGATCAGACTCATGTATCTACTGCGGTAGTTGGGACACAAGGATATGCTGCACCAGAGTATATCGAAACGGGCCATCTCAAAGTTCAGAGTGACATGTGGAGTTTTGGTGTGGTGCTGTATGAGATCCTCACAGGAAGGAGGTCATTGGAAAGGAACCGTCCAACAGCAGAACAGAAGCTACTAGATTGGGTTAAGCATTATCCTGCTGACAGTAGCAGGTTCATCGTGATAATGGATCCGCGCCTCAGGAACCAATATTCTCTTGTCGCAGCCCGCAAGATAGCCAAGTTGGCTGATAGCTGCTTGAAGAAGAATCCAGAAGATAGACCACCCATGAGTCAGATAGTGGAAAGCTTGAAACAAGCATTGCAATTTTCAGAAACATCAAACACTCCTCAAAATACTGGTGAATCCTCTCGGTCTAAATTGGTTCGAAAAAGTAAATAGATGGGGTACATGAAAGAACTTATTATTATTATTATTTTTTATTTTTTATTTTGGAGGATCAAGAACTGGGAAACTTATGAGTTAAACATGAGTTGGAATAGAAGCAGTTTTGGCCATTCTTGGGAGTTAGTGTTTTGTGGGATTTTCCTTTTTTTTTTGGTTAGTTCGTCCCAGCTCAACAAAATCATGTCCTCTGTTTCCTTTGTCAACAACCATTGGCTTTTGATGTACTACTAGTAGAGTTTTAGTGTGATGTGAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00067	263750	266962	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.2.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000067s00006386.1	PF07714.12	Pkinase_Tyr	73	350	1.90E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	33.601
SRR1783600	control	33.556
SRR1783602	moderate drought stress	21.462
SRR1811619	moderate drought stress	21.708

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	26.821
DRR006520	Root Summer glycyrrhizin high producing strain	26.028
DRR006521	Root Winter glycyrrhizin high producing strain	24.925
DRR006522	Root Winter glycyrrhizin high producing strain	24.133
DRR006523	Root Summer glycyrrhizin low producing strain	57.920
DRR006524	Root Summer glycyrrhizin low producing strain	57.395
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.175
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.909

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.751
SRR2868004	Drought Stress (root)	21.107
SRR2967015	Control (root)	13.072

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	34.838
SRR9715740	Leaf	37.776
SRR9715741	Leaf	41.256
SRR9715739	Root	11.154
SRR9715742	Root	32.177
SRR9715743	Root	28.990

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	67.392
SRR8749028	MeJA induced 9h	129.466
SRR8749029	MeJA induced 9h	130.285
SRR8749030	Uninduced	82.695
SRR8749031	Uninduced	93.213
SRR8749032	Uninduced	88.915

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.474
SRR8400027	Control - Root	28.617