Gene detail information of Glyur000067s00006383


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10950.18.00E-45Zinc-binding ribosomal protein family protein
NRXP_006354681.17.24E-61PREDICTED: 60S ribosomal protein L37a-like, partial [Solanum tuberosum]
COGYP_004004387.19.00E-1650S ribosomal protein L37ae [Methanothermus fervidus DSM 2088]
Swissprottr|Q5QM99|RL37A_ORYSJ8.00E-5960S ribosomal protein L37a
trEMBLtr|W5AFP1|W5AFP1_WHEAT6.00E-61Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_1DL_6B00A6A43.2}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00067253121254868-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000067s00006383.1PF01780.14Ribosomal_L37ae421312.00E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control193.898
SRR1783600control194.340
SRR1783602moderate drought stress140.762
SRR1811619moderate drought stress140.226

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain741.727
DRR006520Root Summer glycyrrhizin high producing strain734.200
DRR006521Root Winter glycyrrhizin high producing strain442.182
DRR006522Root Winter glycyrrhizin high producing strain430.202
DRR006523Root Summer glycyrrhizin low producing strain366.210
DRR006524Root Summer glycyrrhizin low producing strain366.408
DRR006525Leaf Summer glycyrrhizin high producing strain151.015
DRR006526Leaf Summer glycyrrhizin high producing strain151.077

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)416.481
SRR2868004Drought Stress (root)270.553
SRR2967015Control (root)285.604

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf196.018
SRR9715740Leaf166.755
SRR9715741Leaf173.503
SRR9715739Root389.481
SRR9715742Root271.579
SRR9715743Root276.193

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1080.802
SRR8749028MeJA induced 9h419.845
SRR8749029MeJA induced 9h878.298
SRR8749030Uninduced220.032
SRR8749031Uninduced167.484
SRR8749032Uninduced308.708

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root454.152
SRR8400027Control - Root373.097

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved