Gene detail information of Glyur000067s00006380 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17080.1 | 2.00E-104 | Histone H3 K4-specific methyltransferase SET7/9 family protein |
| NR | XP_004508974.1 | 0 | PREDICTED: uncharacterized protein LOC101502494 [Cicer arietinum] |
| COG | YP_007120931.1 | 3.00E-30 | hypothetical protein Mic7113_1656 [Microcoleus sp. PCC 7113] |
| Swissprot | tr|Q9SLG9|PI5K5_ARATH | 2.00E-28 | Phosphatidylinositol 4-phosphate 5-kinase 5 |
| trEMBL | tr|V7CC63|V7CC63_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW27719.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00067 | 241855 | 245984 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000067s00006380.1 | PF02493.15 | MORN | 182 | 200 | 0.00021 |
| Glyur000067s00006380.1 | PF02493.15 | MORN | 205 | 227 | 1.40E-06 |
| Glyur000067s00006380.1 | PF02493.15 | MORN | 228 | 250 | 0.0001 |
| Glyur000067s00006380.1 | PF02493.15 | MORN | 251 | 273 | 5.20E-07 |
| Glyur000067s00006380.1 | PF02493.15 | MORN | 274 | 295 | 9.70E-06 |
| Glyur000067s00006380.1 | PF02493.15 | MORN | 297 | 319 | 9.50E-06 |
| Glyur000067s00006380.1 | PF02493.15 | MORN | 320 | 341 | 6.30E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.450 |
| SRR1783600 | control | 3.582 |
| SRR1783602 | moderate drought stress | 3.871 |
| SRR1811619 | moderate drought stress | 3.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.837 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.911 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.057 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.588 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.273 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.205 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.890 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.778 |
| SRR2868004 | Drought Stress (root) | 14.924 |
| SRR2967015 | Control (root) | 18.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.617 |
| SRR9715740 | Leaf | 7.877 |
| SRR9715741 | Leaf | 7.911 |
| SRR9715739 | Root | 1.303 |
| SRR9715742 | Root | 4.025 |
| SRR9715743 | Root | 3.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.067 |
| SRR8749028 | MeJA induced 9h | 19.046 |
| SRR8749029 | MeJA induced 9h | 16.846 |
| SRR8749030 | Uninduced | 4.331 |
| SRR8749031 | Uninduced | 27.772 |
| SRR8749032 | Uninduced | 17.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.879 |
| SRR8400027 | Control - Root | 7.715 |