Gene detail information of Glyur000067s00006370 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17050.1 | 3.00E-120 | ureidoglycine aminohydrolase |
| NR | XP_004508964.1 | 0 | PREDICTED: uncharacterized protein LOC101499522 [Cicer arietinum] |
| COG | YP_003685172.1 | 8.00E-59 | cupin [Meiothermus silvanus DSM 9946] |
| Swissprot | tr|Q8GXV5|UGHY_ARATH | 6.00E-153 | (S)-ureidoglycine aminohydrolase (Precursor) |
| trEMBL | tr|A0A072URB8|A0A072URB8_MEDTR | 4.00E-180 | Ureidoglycine aminohydrolase {ECO:0000313|EMBL:KEH31613.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00067 | 194563 | 200352 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K14977 | ylbA, UGHY | EC:3.5.3.26 | Purine metabolism | map00230 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000067s00006370.1 | PF07883.6 | Cupin_2 | 107 | 164 | 1.80E-06 |
| Glyur000067s00006370.1 | PF07883.6 | Cupin_2 | 221 | 286 | 3.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 49.456 |
| SRR1783600 | control | 49.553 |
| SRR1783602 | moderate drought stress | 46.156 |
| SRR1811619 | moderate drought stress | 46.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.038 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.508 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.878 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.707 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.564 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.152 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.268 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.453 |
| SRR2868004 | Drought Stress (root) | 12.005 |
| SRR2967015 | Control (root) | 12.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.792 |
| SRR9715740 | Leaf | 56.359 |
| SRR9715741 | Leaf | 32.946 |
| SRR9715739 | Root | 12.442 |
| SRR9715742 | Root | 9.722 |
| SRR9715743 | Root | 10.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.716 |
| SRR8749028 | MeJA induced 9h | 13.971 |
| SRR8749029 | MeJA induced 9h | 8.132 |
| SRR8749030 | Uninduced | 1.205 |
| SRR8749031 | Uninduced | 0.533 |
| SRR8749032 | Uninduced | 1.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.583 |
| SRR8400027 | Control - Root | 29.473 |