Gene detail information of Glyur000067s00006365 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17600.1 | 5.00E-73 | Chlorophyll A-B binding family protein |
| NR | AFK39947.1 | 6.34E-126 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SI55|I3SI55_MEDTR | 2.00E-126 | Uncharacterized protein {ECO:0000313|EMBL:AFK39947.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00067 | 156725 | 159690 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000067s00006365.1 | PF00504.16 | Chloroa_b-bind | 171 | 231 | 0.00027 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.427 |
| SRR1783600 | control | 43.874 |
| SRR1783602 | moderate drought stress | 32.776 |
| SRR1811619 | moderate drought stress | 32.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.941 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.387 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.335 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.438 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.489 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.371 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 190.392 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 188.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.870 |
| SRR2868004 | Drought Stress (root) | 44.064 |
| SRR2967015 | Control (root) | 41.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 160.410 |
| SRR9715740 | Leaf | 144.308 |
| SRR9715741 | Leaf | 137.814 |
| SRR9715739 | Root | 17.947 |
| SRR9715742 | Root | 23.734 |
| SRR9715743 | Root | 23.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 75.471 |
| SRR8749028 | MeJA induced 9h | 48.800 |
| SRR8749029 | MeJA induced 9h | 52.891 |
| SRR8749030 | Uninduced | 33.046 |
| SRR8749031 | Uninduced | 23.574 |
| SRR8749032 | Uninduced | 26.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 58.284 |
| SRR8400027 | Control - Root | 59.276 |