Gene detail

Gene detail information of Glyur000067s00006359

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G47120.1	1.00E-69	BAX inhibitor 1
NR	NP_001240126.1	8.63E-145	uncharacterized protein LOC100804444 [Glycine max]
Swissprot	tr\|Q9LD45\|BI1_ARATH	1.00E-119	Bax inhibitor 1
trEMBL	tr\|C6TBL5\|C6TBL5_SOYBN	3.00E-145	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G41380.1}

Sequence

Transcript Sequence

>Glyur000067s00006359.1
ATCGGGAATAAACTAGAAATTTCGCGGTCCTGCACACGGTATATATAAAACCTATACCTATAATACACCGCTGCAGCTTTCTTTCTCGTGTCAATCAATTGCGTTTGTTTTGTGATTTGATTCTCTCTGTCTGATCGAAACCACAATGGACGCGTTCACTTCGTTCTTCGATTCTCAATCGTCTTCGAGAAGCCGCTGGAATTACGATACTCTCAAGAACTTCCGTCAGATTTCTCCCGTCGTTCAGAATCACATCAAACGGGTGTATTTTACGTTATGTTGCGCCGTGGCTGCTTCGGNTGTTGGAGCCTTTCTTCATGTACTGTGGAACATTGGAGGTTTTCTAACTACGGCAGCTTCCCTTGGAAGCATGATTTGGTTGTTATCCACACCTCCCTTTGAAGAGCGAAAGAGGTTGTCTCTCTTGATGGCTTCGGCTCTGTTTCAGGGCGCCTCCATTGGACCCTTGATTGATTTGGCTGTTGTAATTGACCCTAGCCTTATCTTAAGCGCATTTGTGGCAACTTCCTTGGCCTTTGCCTGTTTCTCAGCGGCAGCTTTGGTTGCAAGGCGTAGGGAGTATCTCTACCTTGGAGGCTTGCTTTCTTCTGGGTTGTCTATTCTTATTTGGTTGCACTTTGCTTCCTCTGTCTTTGGGGGTTCAACAGCGCTCTTTAAGTTTGAGTTNTATTTTGGGCTATTGGTGTTTGTAGGCTATGTTGTAGTAGACACCCAAGAAATAATTGAGAGGGCTCACTTTGGTGACCTGGATTATGTGAAGCATGCATTGACCATGTTCACTGATTTGGCTGCTATATTTGTGCGAATTCTTATCATAATGTTGAAGAATTCAGCCGAGAAAAATGAGAAGAAAAAGAAGAGGAGATCAGATTGATATTCTGACCAACTCTCTTTGGAGCTTTTCTTCATTTTAGTGATGTACTTGTGGAGAATATATGAACAGTTTTTTTTTTGTTGATAAATTTTAATTATATATATACAGCTTGTTTATGGTTTTTGTNTTCCGTGGTTCTGAAATGGCAAATTAGGTTACAGCAGCGGGTATATAGTAAATAAAAGTATATACCAAAAGAAAAATGGAACAACTCTTCTGAGACTTNAAACCATGGGACAAATCTGTGAGAAGCACAAACCAAGTTGAACATGAAAGCCATTATATTTGAAGGCTGTGAATTAACAATTCATCCCTTTTGCATATGCATGCTCACACCAAGGTAAAAGCACTGGCCTTCTCCTAGGATAGTATTGTTGCAATACGAGAAAACAATCCAGAAAGATTACAGTAATTAAATCTAAACACATTTCAAACCTTGCCNATATCAAAAGGAAGGAAATATTGACAAAGCAAATAGAACAAGGAGACCAATTTTTGTAAGGTTCAAATATTGTTGGAGTGGATGATCAACCCNGCAATATATAACCTTTATTTATCCTCTTTGTCCAACTCTAGATGGTTGTATCTGTTTTGAACTCTTCGAAGAACTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00067	115307	117952	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000067s00006359.1	PF01027.15	Bax1-I	34	232	2.30E-31

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.788
SRR1783600	control	15.782
SRR1783602	moderate drought stress	12.571
SRR1811619	moderate drought stress	12.441

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	37.311
DRR006520	Root Summer glycyrrhizin high producing strain	36.666
DRR006521	Root Winter glycyrrhizin high producing strain	44.996
DRR006522	Root Winter glycyrrhizin high producing strain	43.346
DRR006523	Root Summer glycyrrhizin low producing strain	42.310
DRR006524	Root Summer glycyrrhizin low producing strain	42.671
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.390
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.222

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	26.302
SRR2868004	Drought Stress (root)	39.749
SRR2967015	Control (root)	29.197

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	21.202
SRR9715740	Leaf	19.185
SRR9715741	Leaf	22.773
SRR9715739	Root	33.234
SRR9715742	Root	35.500
SRR9715743	Root	35.125

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	54.642
SRR8749028	MeJA induced 9h	72.334
SRR8749029	MeJA induced 9h	89.393
SRR8749030	Uninduced	58.697
SRR8749031	Uninduced	91.819
SRR8749032	Uninduced	109.110

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	30.595
SRR8400027	Control - Root	33.773