Gene detail information of Glyur000067s00006345 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN28458.1 | 1.60E-50 | Ethylene-responsive transcription factor 6 [Glycine soja] |
| Swissprot | tr|Q40478|ERF5_TOBAC | 7.00E-08 | Ethylene-responsive transcription factor 5 |
| trEMBL | tr|B7FJH2|B7FJH2_MEDTR | 3.00E-28 | Putative uncharacterized protein {ECO:0000313|EMBL:ACJ84901.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00067 | 31506 | 33171 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 57.528 |
| SRR1783600 | control | 57.597 |
| SRR1783602 | moderate drought stress | 52.894 |
| SRR1811619 | moderate drought stress | 52.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 481.699 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 460.268 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.232 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.373 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 306.890 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 301.651 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 286.240 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 285.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 55.513 |
| SRR2868004 | Drought Stress (root) | 179.698 |
| SRR2967015 | Control (root) | 507.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 348.294 |
| SRR9715740 | Leaf | 491.151 |
| SRR9715741 | Leaf | 413.608 |
| SRR9715739 | Root | 470.261 |
| SRR9715742 | Root | 304.936 |
| SRR9715743 | Root | 313.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 246.609 |
| SRR8749028 | MeJA induced 9h | 274.893 |
| SRR8749029 | MeJA induced 9h | 169.370 |
| SRR8749030 | Uninduced | 186.641 |
| SRR8749031 | Uninduced | 89.489 |
| SRR8749032 | Uninduced | 137.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 162.592 |
| SRR8400027 | Control - Root | 285.722 |