Gene detail information of Glyur000067s00006341 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16790.1 | 4.00E-20 | hydroxyproline-rich glycoprotein family protein |
| NR | XP_006600846.1 | 7.35E-138 | PREDICTED: dentin sialophosphoprotein-like [Glycine max] |
| trEMBL | tr|K7MLN1|K7MLN1_SOYBN | 7.00E-151 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G15390.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00067 | 7169 | 8824 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000067s00006341.1 | PF05553.6 | DUF761 | 512 | 547 | 3.60E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.557 |
| SRR1783600 | control | 3.268 |
| SRR1783602 | moderate drought stress | 5.720 |
| SRR1811619 | moderate drought stress | 5.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.052 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.019 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.855 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.725 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.213 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.198 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.104 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.239 |
| SRR2868004 | Drought Stress (root) | 10.123 |
| SRR2967015 | Control (root) | 7.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.594 |
| SRR9715740 | Leaf | 3.394 |
| SRR9715741 | Leaf | 4.564 |
| SRR9715739 | Root | 2.141 |
| SRR9715742 | Root | 5.567 |
| SRR9715743 | Root | 6.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.645 |
| SRR8749028 | MeJA induced 9h | 0.482 |
| SRR8749029 | MeJA induced 9h | 0.877 |
| SRR8749030 | Uninduced | 0.245 |
| SRR8749031 | Uninduced | 0.186 |
| SRR8749032 | Uninduced | 0.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.047 |
| SRR8400027 | Control - Root | 5.347 |