Gene detail information of Glyur000066s00006262 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60210.2 | 1.00E-76 | ROP interactive partner 5 |
| NR | XP_004487141.1 | 0 | PREDICTED: interactor of constitutive active ROPs 3-like [Cicer arietinum] |
| Swissprot | tr|Q9LSS5|ICR3_ARATH | 8.00E-91 | Interactor of constitutive active ROPs 3 |
| trEMBL | tr|K7M9L2|K7M9L2_SOYBN | 6.00E-179 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G04991.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00066 | 372730 | 380122 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.827 |
| SRR1783600 | control | 5.914 |
| SRR1783602 | moderate drought stress | 10.128 |
| SRR1811619 | moderate drought stress | 10.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.395 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.308 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.050 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.048 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.150 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.958 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.471 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.933 |
| SRR2868004 | Drought Stress (root) | 7.070 |
| SRR2967015 | Control (root) | 11.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.357 |
| SRR9715740 | Leaf | 0.846 |
| SRR9715741 | Leaf | 0.865 |
| SRR9715739 | Root | 0.242 |
| SRR9715742 | Root | 3.517 |
| SRR9715743 | Root | 2.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.096 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.051 |
| SRR8749030 | Uninduced | 0.029 |
| SRR8749031 | Uninduced | 0.069 |
| SRR8749032 | Uninduced | 0.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.397 |
| SRR8400027 | Control - Root | 11.289 |