Gene detail information of Glyur000066s00006227 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28410.1 | 8.00E-15 | |
| NR | KHN11202.1 | 5.08E-70 | hypothetical protein glysoja_034431 [Glycine soja] |
| trEMBL | tr|I1LTI2|I1LTI2_SOYBN | 2.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G29530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00066 | 169854 | 170267 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.501 |
| SRR1783600 | control | 1.649 |
| SRR1783602 | moderate drought stress | 1.361 |
| SRR1811619 | moderate drought stress | 1.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.667 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.211 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.570 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.901 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.827 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.360 |
| SRR2868004 | Drought Stress (root) | 4.751 |
| SRR2967015 | Control (root) | 4.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.904 |
| SRR9715740 | Leaf | 0.531 |
| SRR9715741 | Leaf | 0.213 |
| SRR9715739 | Root | 1.014 |
| SRR9715742 | Root | 1.762 |
| SRR9715743 | Root | 1.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.927 |
| SRR8400027 | Control - Root | 4.326 |