Gene detail information of Glyur000066s00006220 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G45210.1 | 4.00E-15 | Protein of unknown function, DUF584 |
| NR | XP_003540175.1 | 1.47E-38 | PREDICTED: uncharacterized protein LOC100817341 [Glycine max] |
| trEMBL | tr|K7LVG6|K7LVG6_SOYBN | 1.00E-38 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G29471.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00066 | 146843 | 147352 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000066s00006220.1 | PF04520.8 | Senescence_reg | 44 | 109 | 8.30E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.975 |
| SRR1783600 | control | 15.543 |
| SRR1783602 | moderate drought stress | 10.150 |
| SRR1811619 | moderate drought stress | 10.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.607 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.587 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.987 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.036 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 43.560 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.417 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.668 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.609 |
| SRR2868004 | Drought Stress (root) | 13.800 |
| SRR2967015 | Control (root) | 23.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.246 |
| SRR9715740 | Leaf | 3.125 |
| SRR9715741 | Leaf | 2.275 |
| SRR9715739 | Root | 17.520 |
| SRR9715742 | Root | 6.825 |
| SRR9715743 | Root | 11.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.636 |
| SRR8749028 | MeJA induced 9h | 2.395 |
| SRR8749029 | MeJA induced 9h | 1.208 |
| SRR8749030 | Uninduced | 0.568 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.240 |
| SRR8400027 | Control - Root | 2.388 |