Gene detail information of Glyur000065s00004332 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08760.1 | 6.00E-180 | Plant protein of unknown function (DUF936) |
| NR | XP_006590930.1 | 0 | PREDICTED: uncharacterized protein LOC100775984 isoform X3 [Glycine max] |
| trEMBL | tr|I1LJN1|I1LJN1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G13450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00065 | 421026 | 425528 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000065s00004332.1 | PF06075.7 | DUF936 | 4 | 717 | 1.50E-180 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.156 |
| SRR1783600 | control | 13.309 |
| SRR1783602 | moderate drought stress | 12.552 |
| SRR1811619 | moderate drought stress | 12.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.866 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.718 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.818 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.590 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.772 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.605 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.461 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.655 |
| SRR2868004 | Drought Stress (root) | 28.407 |
| SRR2967015 | Control (root) | 29.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.611 |
| SRR9715740 | Leaf | 0.716 |
| SRR9715741 | Leaf | 1.448 |
| SRR9715739 | Root | 2.439 |
| SRR9715742 | Root | 19.038 |
| SRR9715743 | Root | 17.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.718 |
| SRR8749028 | MeJA induced 9h | 1.358 |
| SRR8749029 | MeJA induced 9h | 1.052 |
| SRR8749030 | Uninduced | 0.301 |
| SRR8749031 | Uninduced | 0.497 |
| SRR8749032 | Uninduced | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.982 |
| SRR8400027 | Control - Root | 38.163 |