Gene detail information of Glyur000065s00004327 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07565.1 | 5.00E-52 | Protein of unknown function (DUF3755) |
| NR | KHN25313.1 | 5.23E-74 | hypothetical protein glysoja_010230 [Glycine soja] |
| trEMBL | tr|K7LT42|K7LT42_SOYBN | 7.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05410.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00065 | 397504 | 407301 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000065s00004327.1 | PF12579.3 | DUF3755 | 166 | 196 | 7.70E-09 |
| Glyur000065s00004327.1 | PF12579.3 | DUF3755 | 392 | 411 | 4.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.080 |
| SRR1783600 | control | 1.060 |
| SRR1783602 | moderate drought stress | 1.078 |
| SRR1811619 | moderate drought stress | 1.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.890 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.068 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.816 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.585 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.727 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.920 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.782 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.040 |
| SRR2868004 | Drought Stress (root) | 3.895 |
| SRR2967015 | Control (root) | 4.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.731 |
| SRR9715740 | Leaf | 2.366 |
| SRR9715741 | Leaf | 3.047 |
| SRR9715739 | Root | 0.735 |
| SRR9715742 | Root | 1.029 |
| SRR9715743 | Root | 0.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.186 |
| SRR8749028 | MeJA induced 9h | 4.974 |
| SRR8749029 | MeJA induced 9h | 4.703 |
| SRR8749030 | Uninduced | 3.490 |
| SRR8749031 | Uninduced | 2.504 |
| SRR8749032 | Uninduced | 1.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.336 |
| SRR8400027 | Control - Root | 2.801 |