Gene detail information of Glyur000065s00004311 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30695.2 | 8.00E-07 | |
| NR | KHN25325.1 | 5.50E-71 | Trigger factor [Glycine soja] |
| trEMBL | tr|I1LQA3|I1LQA3_SOYBN | 5.00E-72 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05280.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00065 | 316032 | 318916 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.965 |
| SRR1783600 | control | 1.049 |
| SRR1783602 | moderate drought stress | 3.693 |
| SRR1811619 | moderate drought stress | 3.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.743 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.485 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.087 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.870 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.640 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.440 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 64.927 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 64.407 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.636 |
| SRR2868004 | Drought Stress (root) | 1.846 |
| SRR2967015 | Control (root) | 1.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.676 |
| SRR9715740 | Leaf | 45.847 |
| SRR9715741 | Leaf | 14.080 |
| SRR9715739 | Root | 0.590 |
| SRR9715742 | Root | 0.465 |
| SRR9715743 | Root | 0.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.977 |
| SRR8749028 | MeJA induced 9h | 2.490 |
| SRR8749029 | MeJA induced 9h | 2.148 |
| SRR8749030 | Uninduced | 1.683 |
| SRR8749031 | Uninduced | 1.200 |
| SRR8749032 | Uninduced | 2.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.219 |
| SRR8400027 | Control - Root | 5.968 |