Gene detail information of Glyur000065s00004304 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49470.1 | 2.00E-71 | Family of unknown function (DUF716) |
| NR | XP_004507372.1 | 0 | PREDICTED: uncharacterized protein LOC101508591 [Cicer arietinum] |
| trEMBL | tr|I1LQ93|I1LQ93_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00065 | 293303 | 294184 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000065s00004304.1 | PF04819.7 | DUF716 | 120 | 258 | 1.10E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.629 |
| SRR1783600 | control | 18.648 |
| SRR1783602 | moderate drought stress | 33.932 |
| SRR1811619 | moderate drought stress | 33.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 57.846 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 59.168 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.380 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.444 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.150 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.267 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.567 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 84.253 |
| SRR2868004 | Drought Stress (root) | 119.885 |
| SRR2967015 | Control (root) | 62.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.514 |
| SRR9715740 | Leaf | 42.598 |
| SRR9715741 | Leaf | 39.886 |
| SRR9715739 | Root | 22.921 |
| SRR9715742 | Root | 87.901 |
| SRR9715743 | Root | 76.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.081 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.069 |
| SRR8749030 | Uninduced | 0.072 |
| SRR8749031 | Uninduced | 0.087 |
| SRR8749032 | Uninduced | 0.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.547 |
| SRR8400027 | Control - Root | 13.519 |