Gene detail information of Glyur000065s00004298 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN25333.1 | 4.32E-15 | hypothetical protein glysoja_010250 [Glycine soja] |
| trEMBL | tr|I1LQ91|I1LQ91_SOYBN | 2.00E-15 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00065 | 247389 | 247643 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.409 |
| SRR1783600 | control | 1.409 |
| SRR1783602 | moderate drought stress | 3.355 |
| SRR1811619 | moderate drought stress | 2.741 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.025 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.097 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 907.944 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 877.509 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.693 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.875 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.296 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.222 |
| SRR2868004 | Drought Stress (root) | 0.304 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.412 |
| SRR9715740 | Leaf | 1.337 |
| SRR9715741 | Leaf | 1.371 |
| SRR9715739 | Root | 1.686 |
| SRR9715742 | Root | 1.039 |
| SRR9715743 | Root | 0.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2854.152 |
| SRR8749028 | MeJA induced 9h | 1778.584 |
| SRR8749029 | MeJA induced 9h | 4127.228 |
| SRR8749030 | Uninduced | 1809.501 |
| SRR8749031 | Uninduced | 3896.382 |
| SRR8749032 | Uninduced | 6084.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.319 |
| SRR8400027 | Control - Root | 17.584 |