Gene detail information of Glyur000065s00004297 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G15960.1 | 7.00E-11 | |
| NR | XP_003537912.1 | 2.98E-23 | PREDICTED: uncharacterized protein LOC100812889 [Glycine max] |
| trEMBL | tr|I1LJJ9|I1LJJ9_SOYBN | 1.00E-23 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G13130.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00065 | 244590 | 244835 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.300 |
| SRR1783600 | control | 5.231 |
| SRR1783602 | moderate drought stress | 3.955 |
| SRR1811619 | moderate drought stress | 3.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.475 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.685 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4229.268 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4209.663 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.635 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.983 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 384.809 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 383.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.798 |
| SRR2868004 | Drought Stress (root) | 21.277 |
| SRR2967015 | Control (root) | 22.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.070 |
| SRR9715740 | Leaf | 13.078 |
| SRR9715741 | Leaf | 10.186 |
| SRR9715739 | Root | 3.805 |
| SRR9715742 | Root | 7.727 |
| SRR9715743 | Root | 5.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3204.918 |
| SRR8749028 | MeJA induced 9h | 3271.756 |
| SRR8749029 | MeJA induced 9h | 3142.137 |
| SRR8749030 | Uninduced | 600.462 |
| SRR8749031 | Uninduced | 3416.688 |
| SRR8749032 | Uninduced | 3013.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 196.092 |
| SRR8400027 | Control - Root | 317.088 |