Gene detail

Gene detail information of Glyur000065s00004296

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G23460.1	extra-large G-protein 1
NR	XP_003540686.2	PREDICTED: extra-large guanine nucleotide-binding protein 1-like [Glycine max]
Swissprot	tr\|O80462\|XLG1_ARATH	Extra-large guanine nucleotide-binding protein 1
trEMBL	tr\|K7LT25\|K7LT25_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G05180.2}

Sequence

Transcript Sequence

>Glyur000065s00004296.1
TTGTGTCTTTGGAATTGGCTTCAAATGGCTTCGCTTCTGAAAAAACTGCGCCCTGGTGTGCCTTCAGTGATTCACGATTATGGTGGTGGTGATTACAGTTTTGAGTATTCCTTTGCAGAGGAATACAAAGGCCCNTCTCTGAGCTATTCCATCCCCGAAGCACTTCCTTTCAACCTTGACCAAATCCAACTAGCACCTATTGCTGATCCTTCTACCCCTCATCACTCTTTAGTTCCAGTTATCCAACCACTCAGAATAACCAATGCTACACTTTCTCTTCTGTCTTCAAATTCTCACCCTCCTGCTCTTGAATTTGAAGTTCATGATGGTTGTGGTGATGATCATAAACAAGACACAGAGTTATTGGCTTCAACTTCAATTTCAAGCTCTAGTTCTGTTTCTTCTGAGATACCACCATGCAGAGGAGAGGATCTTGTGAGGCCACATGCTGTGAGAGTTGGGAAGAAAGGCACGTGCTATCGGTGTCTTAAAGGGAACCATCTCACACAAAGGGAGGTTTGCATTGTTTGCAGTGCAAAGTATTGCCGCAACTGTGTCCTTAGAGCAATGGGGTCAATGCCTGAAGGAAGAAAATGTGTCNCTTGCATTGGTTATAGGATTGATGAGAACAAGCGTGGGAAACTTGGTAAATTTTCTCGGATGCTCAAACACATGCTGTCTGAGTTGGAAGTAGAACAGATCATGCAGGCTGAAATGTTCTGTGAGGCAAATCAAATACCAGCAGGGAAGGTTCGTGTGAATGGAGAACCTCTTGATTGGGATCAGCTCATGTTACTCTTGACCTGTCCAAACCCACCAAGAGGTTTGAAACCTGGTTTCTATTGGTATGATAAAGCTTCTGGCTTTTGGGGAAAGGAAGGTCAACGGCCAAGTCAAATCATCAGCCCACAGCTAGAGGTTGGGGATCACTTGCAGAGAGGTGCAAGTGGTGGAAAGACAAATGTAACTATAAATGGTCGAGAGATTACTAAAGAAGAGCTCCGGATATTGAAGTGGGCAGGAGTGGCGTGTGAAGGAACAACTGATTTTTGGGTGAGTCCTGATGGATCATACATGGAAGTTGGACAAAAGAATGTCAAGGGGCGTATATGGGATAAGCTCACAACGAAGCTAGCATCTACAATTCTATCACTGCCAGTTCCTCGTAGCTCTGTTGTGACTCTTTCTGGCGAAGGAGAAAATAGAGTTACTAGCCAATACAACCTTCATCGGAAAATGCTTCACAAATTTCTACTTGTTGGTTCGGTCAAGTCCGGAACATGTACCATATTTAAACAGGCCAAGCTGCTGTATAATGTTCCTTTCTCTGACAATGAGCGCCAAGAGATGAAGTTGGTAATTCAAAGCAACTTGTATAGGTACCTTGGTATACTGTTGGAGGCGCGAGAATTTTTTGAAGAGAGTTTGTGCGGGAACAAGAACGGAAGGCATGTTGATGAATCAACTTCATCTGGTAAGCTGGATGTAATATTTCCAGCTGCTACTCGTGAATATGCGCCAATGGTGGAGGAGCTGTGGAGGGATCCAGCCATTCAAGCCACTTACAATAGAACAAATAAAATCAAAATGCTACCTAGAAGTGCAAGTTATTTTCTAGCTCGGGCTCCTGAGATTTGCAAGATAGACTATGAACCCTTGGACATGGACATCTTGTACGCTGAGGGGATAACCTTATCCAACAGCCTCACTTCCATGGAATTTTCATTTCCCGTGACAGCTCATNAGGACTATTTGGACCCTGATTATCAGCATGATCCTTCTCTCAGGTACCAACTTATTAGAGTAAATCCAAGAACCCTTGGAGAAAACTGCAAGTGGTTGGACATGTTTGAAGACACTGATGTAGTCTTGTTCTCTGTGGCCTTAACTGACTATGATGAGTACACATTAGACAGCAATGGAGTTGCTACCAACAAAATTTTGGCAGCAAAGCATCTCTTTGAAAACATCATCACTCATAGTACAGTCTTCAATAGCAAGAAATTCCTCTTGATACTGACCAAATTCGATCTGCTTGAGGAAAAGATTGAAAGGGTACCCCTAACAAGATGTGAATGGTTCTGTGACTTCCATCCAGTTATCAGCCACAACCACAAGAGTAAACCCAAAAAGAATCNGACTGCATTAGCTCTAAGTGCTTTTCAATATATTGCTGTCAAGTTCAAGAGATTGTTCCATTCTCGTACTGGCAGAAAGCTGTTTGTTTCACTGGTTACTGGATTGGAACCTGATACTGTTGATGAAGCTCTCAGATATGCAAGAGAGGTTATGGCATGGGATCTCTCTTCCAAGAATGAAAAGTCTGAGATAACTTCAACAACCAATGAGGAGGCAAGTTCCTTATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00065	239184	243414	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0007165 signal transduction

GO:0007186 G-protein coupled receptor signaling pathway

molecular_function

GO:0003924 GTPase activity

GO:0004871 signal transducer activity

GO:0019001 guanyl nucleotide binding

GO:0031683 G-protein beta/gamma-subunit complex binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000065s00004296.1	PF00503.15	G-alpha	408	763	8.10E-59

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.126
SRR1783600	control	0.139
SRR1783602	moderate drought stress	0.079
SRR1811619	moderate drought stress	0.067

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.070
DRR006520	Root Summer glycyrrhizin high producing strain	0.091
DRR006521	Root Winter glycyrrhizin high producing strain	0.214
DRR006522	Root Winter glycyrrhizin high producing strain	0.175
DRR006523	Root Summer glycyrrhizin low producing strain	0.092
DRR006524	Root Summer glycyrrhizin low producing strain	0.138
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.152
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.358

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.074
SRR2868004	Drought Stress (root)	0.152
SRR2967015	Control (root)	0.211

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.368
SRR9715740	Leaf	5.610
SRR9715741	Leaf	7.906
SRR9715739	Root	0.062
SRR9715742	Root	0.296
SRR9715743	Root	0.390

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.188
SRR8749028	MeJA induced 9h	0.465
SRR8749029	MeJA induced 9h	0.378
SRR8749030	Uninduced	0.516
SRR8749031	Uninduced	1.470
SRR8749032	Uninduced	3.871

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.312
SRR8400027	Control - Root	0.212