Gene detail information of Glyur000065s00004286 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32980.1 | 2.00E-103 | |
| NR | XP_003556069.1 | 1.45E-157 | PREDICTED: uncharacterized protein LOC100816472 [Glycine max] |
| trEMBL | tr|I1NGL0|I1NGL0_SOYBN | 5.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G28950.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00065 | 156422 | 158616 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000065s00004286.1 | PF15003.1 | HAUS2 | 7 | 217 | 5.20E-101 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.015 |
| SRR1783600 | control | 8.087 |
| SRR1783602 | moderate drought stress | 8.506 |
| SRR1811619 | moderate drought stress | 8.494 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.617 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.536 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.256 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.419 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.266 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.810 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.117 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.217 |
| SRR2868004 | Drought Stress (root) | 14.849 |
| SRR2967015 | Control (root) | 12.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.084 |
| SRR9715740 | Leaf | 4.454 |
| SRR9715741 | Leaf | 3.520 |
| SRR9715739 | Root | 4.785 |
| SRR9715742 | Root | 4.423 |
| SRR9715743 | Root | 5.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.994 |
| SRR8749028 | MeJA induced 9h | 19.587 |
| SRR8749029 | MeJA induced 9h | 26.613 |
| SRR8749030 | Uninduced | 21.470 |
| SRR8749031 | Uninduced | 16.838 |
| SRR8749032 | Uninduced | 22.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.648 |
| SRR8400027 | Control - Root | 13.250 |