Gene detail information of Glyur000065s00004275 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16070.2 | 4.00E-45 | plastid division2 |
| NR | KEH30380.1 | 1.24E-147 | plastid division protein PDV2, putative [Medicago truncatula] |
| Swissprot | tr|Q9XII1|PDV2_ARATH | 1.00E-82 | Plastid division protein PDV2 |
| trEMBL | tr|A0A072UX16|A0A072UX16_MEDTR | 5.00E-148 | Plastid division protein PDV2, putative {ECO:0000313|EMBL:KEH30380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00065 | 106031 | 108682 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.620 |
| SRR1783600 | control | 28.107 |
| SRR1783602 | moderate drought stress | 22.410 |
| SRR1811619 | moderate drought stress | 22.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.108 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.432 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.798 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.589 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.407 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.161 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.936 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.752 |
| SRR2868004 | Drought Stress (root) | 13.370 |
| SRR2967015 | Control (root) | 14.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.296 |
| SRR9715740 | Leaf | 62.408 |
| SRR9715741 | Leaf | 27.972 |
| SRR9715739 | Root | 6.454 |
| SRR9715742 | Root | 13.297 |
| SRR9715743 | Root | 15.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.709 |
| SRR8749028 | MeJA induced 9h | 11.817 |
| SRR8749029 | MeJA induced 9h | 21.140 |
| SRR8749030 | Uninduced | 11.502 |
| SRR8749031 | Uninduced | 5.565 |
| SRR8749032 | Uninduced | 6.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.348 |
| SRR8400027 | Control - Root | 34.390 |