Gene detail information of Glyur000065s00004260 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34320.1 | 1.00E-139 | Protein of unknown function (DUF677) |
| NR | XP_003541076.1 | 0 | PREDICTED: UPF0496 protein At4g34320-like [Glycine max] |
| Swissprot | tr|Q9SYZ7|U496A_ARATH | 0 | UPF0496 protein At4g34320 |
| trEMBL | tr|I1LQ60|I1LQ60_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G04970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00065 | 19871 | 22101 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000065s00004260.1 | PF05055.7 | DUF677 | 68 | 394 | 2.20E-134 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.763 |
| SRR1783600 | control | 0.701 |
| SRR1783602 | moderate drought stress | 0.169 |
| SRR1811619 | moderate drought stress | 0.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.035 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.127 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.417 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.407 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.824 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.359 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.069 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.126 |
| SRR2868004 | Drought Stress (root) | 6.096 |
| SRR2967015 | Control (root) | 4.650 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.769 |
| SRR9715740 | Leaf | 0.766 |
| SRR9715741 | Leaf | 3.628 |
| SRR9715739 | Root | 2.226 |
| SRR9715742 | Root | 17.352 |
| SRR9715743 | Root | 18.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.775 |
| SRR8749028 | MeJA induced 9h | 6.071 |
| SRR8749029 | MeJA induced 9h | 8.756 |
| SRR8749030 | Uninduced | 4.963 |
| SRR8749031 | Uninduced | 4.588 |
| SRR8749032 | Uninduced | 6.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.204 |
| SRR8400027 | Control - Root | 5.053 |