Gene detail information of Glyur000064s00005665 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G12420.1 | 2.00E-179 | ACT domain repeat 8 |
| NR | XP_004511642.1 | 0 | PREDICTED: uncharacterized protein LOC101488930 [Cicer arietinum] |
| COG | YP_758241.1 | 2.00E-08 | UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10] |
| Swissprot | tr|Q9LNA5|ACR8_ARATH | 0 | ACT domain-containing protein ACR8 {ECO:0000305} |
| trEMBL | tr|I1LGK6|I1LGK6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G03160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00064 | 405021 | 408463 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000064s00005665.1 | PF01842.20 | ACT | 42 | 94 | 9.70E-09 |
| Glyur000064s00005665.1 | PF01842.20 | ACT | 115 | 166 | 1.00E-08 |
| Glyur000064s00005665.1 | PF01842.20 | ACT | 325 | 386 | 2.70E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.788 |
| SRR1783600 | control | 8.948 |
| SRR1783602 | moderate drought stress | 6.485 |
| SRR1811619 | moderate drought stress | 6.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.067 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.703 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.157 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.524 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.615 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 45.390 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.758 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.749 |
| SRR2868004 | Drought Stress (root) | 34.185 |
| SRR2967015 | Control (root) | 36.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.209 |
| SRR9715740 | Leaf | 2.994 |
| SRR9715741 | Leaf | 5.039 |
| SRR9715739 | Root | 11.189 |
| SRR9715742 | Root | 19.315 |
| SRR9715743 | Root | 17.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 359.301 |
| SRR8749028 | MeJA induced 9h | 339.353 |
| SRR8749029 | MeJA induced 9h | 159.360 |
| SRR8749030 | Uninduced | 59.493 |
| SRR8749031 | Uninduced | 68.661 |
| SRR8749032 | Uninduced | 83.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.950 |
| SRR8400027 | Control - Root | 31.389 |