Gene detail information of Glyur000064s00005658 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60780.1 | 2.00E-60 | Protein of unknown function (DUF1442) |
| NR | XP_004511649.1 | 4.91E-129 | PREDICTED: uncharacterized protein LOC101491309 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7KG69|G7KG69_MEDTR | 7.00E-123 | Uncharacterized protein {ECO:0000313|EMBL:AFK47480.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00064 | 354343 | 355216 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000064s00005658.1 | PF07279.6 | DUF1442 | 27 | 253 | 3.10E-84 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.929 |
| SRR1783600 | control | 4.593 |
| SRR1783602 | moderate drought stress | 3.206 |
| SRR1811619 | moderate drought stress | 3.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.678 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.716 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.883 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.694 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 70.915 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 70.293 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 117.009 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 115.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.347 |
| SRR2868004 | Drought Stress (root) | 84.188 |
| SRR2967015 | Control (root) | 51.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.093 |
| SRR9715740 | Leaf | 36.283 |
| SRR9715741 | Leaf | 61.208 |
| SRR9715739 | Root | 39.332 |
| SRR9715742 | Root | 47.864 |
| SRR9715743 | Root | 43.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 99.740 |
| SRR8749028 | MeJA induced 9h | 221.693 |
| SRR8749029 | MeJA induced 9h | 230.897 |
| SRR8749030 | Uninduced | 20.477 |
| SRR8749031 | Uninduced | 106.189 |
| SRR8749032 | Uninduced | 142.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.536 |
| SRR8400027 | Control - Root | 19.452 |