Gene detail

Gene detail information of Glyur000064s00005640.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G12240.1	0	Glycosyl hydrolases family 32 protein
NR	KHN42709.1	0	Acid beta-fructofuranosidase [Glycine soja]
COG	YP_004640399.1	8.00E-49	sucrose-6-phosphate hydrolase [Paenibacillus mucilaginosus KNP414]
Swissprot	tr\|P29001\|INVA_VIGRR	0	Acid beta-fructofuranosidase 38 kDa subunit (Precursor)
trEMBL	tr\|I1J9X6\|I1J9X6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G41990.1}

Sequence

Transcript Sequence

>Glyur000064s00005640.1
ATGGTACGCCCCAACACAATTGACCGTTCCTCTGATGATCTCCCAGCTTGTTCATACATTCCCGTACCCGATGGACCCCACTCCGGTGGAGTTTCGGCTGAGCCTGATCGCAGACACCTGAAGGGGGTGCTTGTGATCTTCTGTGGGTTGCTAGTGCTTGTTTCCTTGGTGGCCTTCAATGGCTACAGGGATTCAAATGGACATGGAGATCATGTGTCGTTGCCAACGTTAATAACATCCAATGAGAATGAAGAATTGAATCCCAAAACAGTAGTACCTTTGCCAACATGGCAGCCCTCGGTGTCACGNGGTGTGTCTGCAGGGGTGTCAGAGAAGTCCAACAGGTTATTCACCGGCAACATTGGAGTTGGAGAATCGTATCCTTGGAACAACAGTATGCTGTCGTGGCAGAGAACAGCCTTCCATTTCCAACCCGAGAAGAATTGGATGAATGGTCCAATGTACTACAAGGGGTGGTATCACTTCTTCTACCAGTACAATCCGGAGGGTCCAGTTTGGGGTGACAACATAGTATGGGGACACGCCGTGTCAAGGGACTTAATCCATTGGCTTCACCTCCCAGTAGCAATGGTAGGCGACGAATGGTATGACAAAAACGGTGTTTGGACCGGTTCAGCCACAATCTTACCCAACGGTGAAGTCATCATGCTCTACACCGGTTCCACCAACGAGTCAGTTCAGGTTCAGAACCTTGCCTACCCTGCTGACCCCTCTGACCCACTCCTCATTGACTGGGTCAAATACCCTTCAAACCCTGTCCTGTTCCCACCACCAGGCATTGGTGCCAAGGATTTCCGTGACCCAACCACCGCTTGGATCACCTCAAAAGGAAAATGGCGCATCACAATTGGTTCCAAGGTTAACAAAACCGGTGTCGCNTTGGTTTATGACACCGAAGACTTCAAGACCTATGAGCGTGTAGAGGGAATGCTCCATGCTGTTCCTGGAACTGGCATGTGGGAATGTGTTGACTTCTTCCCTGTTTCTACCAAGGCCGAGAATGGCTTGGACACGTCATTTAATGGGGATGATGTGCGGCACGTGATGAAGGTTAGCCTGGATGATGATAGACACGATTACTACGCGCTTGGGAGTTATGATGAANAGAAGGTTAAGTTTATACCGAGTGATTTCGAGAATGATGTTGGTATTGGACTCAGGTATGACTATGGTANATTCTATGCNTCCAAGACGTTTTATGATCAGAGTAAAGGGAGGAGAGTTTTGTGGGGTTGGATTGGAGAGTCTGACAGCGAATATGCTGATGTGGCCAAAGGATGGGCATCACTTCAGGGTATTCCAAGAACAGTTATGCTTGATAAAAGAACGGGTAGCAACTTACTTCAATGGCCTGTTGCTGAGGTGGAGAGTTTGAGATTGAAAAGCGACGAATTTGAAAATTTGAAGGCGAAGCCAGGGTCAGTGGTGCCACTAGATATTGGAACAGCCGCACAGTTGGACATTGTAGCTGAGTTTGAGATGGATAAGGAGGCCGTGGAGAGGATAAACGGGTCCAAAGTGGAGTACAAGTGTGGAACCAGTGGTGGAGCAGCCGAACGCGGTGCCTTAGGACCTTTTGGTCTATTGGTTCTGGCAGATGATGGCCTTTCTGAATATACTCCTGTCTACTTCTATGTTGTTAAAGGAAGCGATGGACATCTCAAGACTTCCTTCTGCTCTGATCAATCAAGGTCATCTTTGGCAACTGATGTTGATAAGAAAATCTTTGGAAGCTTTGTTCCGGTACTCAAAGACGAGAAGCTATCTGTAAGGATCTTGGTGGACCATTCTGTGGTTGAAAGCTTTGCGCAAGGTGGAAGGACGTGTGTGACTTCCCGGGTTTATCCAACGAGGGCAATCTATGGAGCAGCTCGATTGTTCTTGTTCAATAATGCTACTGAGGCCACTGTGACTGCCTCAATCAAGGTTTGGCAGATGAATTCTGCATTCATACATCCGTTCCACCCTGACCAGAAGAGCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00064	274758	278328	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GH32

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01193	INV, sacA	EC:3.2.1.26	Galactose metabolism	map00052
			Starch and sucrose metabolism	map00500

Gene Ontology

biological_process
GO:0005975 carbohydrate metabolic process

molecular_function

GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0004564 beta-fructofuranosidase activity

GO:0004575 sucrose alpha-glucosidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000064s00005640.1	PF11837.3	DUF3357	16	134	1.00E-21
Glyur000064s00005640.1	PF00251.15	Glyco_hydro_32N	142	458	6.10E-113
Glyur000064s00005640.1	PF08244.7	Glyco_hydro_32C	529	613	8.20E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.036
SRR1783600	control	0.037
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.019

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.116
DRR006520	Root Summer glycyrrhizin high producing strain	0.993
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.331
DRR006524	Root Summer glycyrrhizin low producing strain	0.275
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.930
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.798

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.369
SRR2868004	Drought Stress (root)	46.637
SRR2967015	Control (root)	9.500

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.755
SRR9715740	Leaf	4.584
SRR9715741	Leaf	8.132
SRR9715739	Root	0.916
SRR9715742	Root	2.809
SRR9715743	Root	2.694

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.688
SRR8749028	MeJA induced 9h	1.732
SRR8749029	MeJA induced 9h	2.500
SRR8749030	Uninduced	9.213
SRR8749031	Uninduced	17.895
SRR8749032	Uninduced	4.729

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.282
SRR8400027	Control - Root	5.526