Gene detail

Gene detail information of Glyur000064s00005635

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G12440.2	2.00E-72	adenine phosphoribosyl transferase 4
NR	KHN34953.1	1.31E-105	Adenine phosphoribosyltransferase 1, chloroplastic [Glycine soja]
COG	YP_002601798.1	3.00E-53	hypothetical protein HRM2_05200 [Desulfobacterium autotrophicum HRM2]
Swissprot	tr\|Q9SU38\|APT4_ARATH	5.00E-91	Adenine phosphoribosyltransferase 4
trEMBL	tr\|I1LGN2\|I1LGN2_SOYBN	5.00E-107	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G03400.2}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00064	244842	250785	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00759	APRT, apt	EC:2.4.2.7	Purine metabolism	map00230

Gene Ontology

biological_process

GO:0006168 adenine salvage

GO:0009116 nucleoside metabolic process

cellular_component
GO:0005737 cytoplasm

molecular_function
GO:0003999 adenine phosphoribosyltransferase activity

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Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000064s00005635.1	PF00156.22	Pribosyltran	75	198	4.00E-22

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	23.151
SRR1783600	control	24.496
SRR1783602	moderate drought stress	10.857
SRR1811619	moderate drought stress	11.323

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	42.112
DRR006520	Root Summer glycyrrhizin high producing strain	41.533
DRR006521	Root Winter glycyrrhizin high producing strain	0.119
DRR006522	Root Winter glycyrrhizin high producing strain	0.224
DRR006523	Root Summer glycyrrhizin low producing strain	23.169
DRR006524	Root Summer glycyrrhizin low producing strain	23.843
DRR006525	Leaf Summer glycyrrhizin high producing strain	26.111
DRR006526	Leaf Summer glycyrrhizin high producing strain	26.178

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	54.573
SRR2868004	Drought Stress (root)	30.220
SRR2967015	Control (root)	23.384

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.957
SRR9715740	Leaf	2.915
SRR9715741	Leaf	3.807
SRR9715739	Root	7.918
SRR9715742	Root	21.916
SRR9715743	Root	21.755

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.718
SRR8749028	MeJA induced 9h	0.176
SRR8749029	MeJA induced 9h	0.970
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.421

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	38.506
SRR8400027	Control - Root	48.931