Gene detail information of Glyur000064s00005632 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62520.1 | 5.00E-76 | |
| NR | XP_007157337.1 | 9.17E-167 | hypothetical protein PHAVU_002G061700g [Phaseolus vulgaris] |
| trEMBL | tr|V7CKA4|V7CKA4_PHAVU | 3.00E-167 | Uncharacterized protein {ECO:0000313|EMBL:ESW29331.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00064 | 238258 | 239121 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.949 |
| SRR1783600 | control | 2.236 |
| SRR1783602 | moderate drought stress | 1.821 |
| SRR1811619 | moderate drought stress | 1.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.658 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.067 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.129 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.031 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.132 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.046 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.684 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.602 |
| SRR2868004 | Drought Stress (root) | 2.702 |
| SRR2967015 | Control (root) | 2.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.949 |
| SRR9715740 | Leaf | 0.999 |
| SRR9715741 | Leaf | 0.686 |
| SRR9715739 | Root | 6.399 |
| SRR9715742 | Root | 6.771 |
| SRR9715743 | Root | 7.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.628 |
| SRR8749028 | MeJA induced 9h | 11.282 |
| SRR8749029 | MeJA induced 9h | 6.700 |
| SRR8749030 | Uninduced | 9.555 |
| SRR8749031 | Uninduced | 2.158 |
| SRR8749032 | Uninduced | 2.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.203 |
| SRR8400027 | Control - Root | 7.217 |