Gene detail information of Glyur000064s00005628 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G12490.1 | 7.00E-12 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_003611290.1 | 5.30E-19 | Proline-rich protein [Medicago truncatula] |
| Swissprot | tr|Q9SU34|ERLL2_ARATH | 5.00E-14 | pEARLI1-like lipid transfer protein 2 (Precursor) |
| trEMBL | tr|G7JW15|G7JW15_MEDTR | 2.00E-19 | Lipid transfer protein {ECO:0000313|EMBL:AES94248.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00064 | 204946 | 206202 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000064s00005628.1 | PF14547.1 | Hydrophob_seed | 2 | 48 | 9.30E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.070 |
| SRR1783600 | control | 0.977 |
| SRR1783602 | moderate drought stress | 2.017 |
| SRR1811619 | moderate drought stress | 2.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.743 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.665 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.516 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.555 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.130 |
| SRR2868004 | Drought Stress (root) | 3.075 |
| SRR2967015 | Control (root) | 2.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.100 |
| SRR9715740 | Leaf | 0.562 |
| SRR9715741 | Leaf | 1.572 |
| SRR9715739 | Root | 1.005 |
| SRR9715742 | Root | 1.076 |
| SRR9715743 | Root | 0.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.984 |
| SRR8749028 | MeJA induced 9h | 1.545 |
| SRR8749029 | MeJA induced 9h | 2.636 |
| SRR8749030 | Uninduced | 0.327 |
| SRR8749031 | Uninduced | 0.035 |
| SRR8749032 | Uninduced | 0.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.504 |
| SRR8400027 | Control - Root | 1.258 |