Gene detail

Gene detail information of Glyur000064s00005609.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G16600.1	0	Nucleotide-diphospho-sugar transferases superfamily protein
NR	XP_004511683.1	0	PREDICTED: putative glucuronosyltransferase PGSIP8-like [Cicer arietinum]
COG	YP_002525241.1	5.00E-12	glycosyl transferase family protein [Rhodobacter sphaeroides KD131]
Swissprot	tr\|F4JMI5\|GUX7_ARATH	0	Putative glucuronosyltransferase PGSIP7
trEMBL	tr\|V7CKB6\|V7CKB6_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW29346.1}

Sequence

Transcript Sequence

>Glyur000064s00005609.1
ATGGGTCGCAATGCAAGTTCTCTGAGATGGTTGCTGCTCTTGTCATTGGGNTTATGGCATTTGTCCTCCGCACCGTGCATCGAAGCGACGTCGTCTACACAGAGGTACAAGAATGCATACGCGACGATGATGTACGTGGGGACGCCAAGGGACTACGAGTTCTACGTCGCCGTGCGAGTCCTCCTTAAATCCCTTTCCAAACTAAACGTTGAAGCCGATCTCGTCGTCATTGCTTCCGTCGATGTCCCTCTCCGATGGATTCAAGCTCTTGAAGAGGAAGATGGTGCGAGAGTGGTAAGGGTGGAAAACATGGACAATCCCTACAAGCATCAAGATAATTTTGACAAGAGATTTAAGTTATCGCTGAACAAACTCTATGCGTGGAGCTTAGTGGACTATGACAGGGTCGTCATGCTGGACGCAGACAACCTCTTCCTTCAAAACACTGATGAGTTGTTTCAGTGTGGACAATTTTGTGCCGTCTTNATCAATCCTTGCATCTTCCACACTGGCCTCTTCGTCTTGCAGCCATCTATGGTGGTGTTCAAGGACATGGTTCATGAATTACAAAACGGGAGAAAGAATCCAGATGGTGCAGACCAGGGTTTTATAACTAGCTACTTCCCCGATTTGCTTGATAAGCCAATGTTTCACCCTCCTCCAAATGGCACCAAGCTTGACGGAACATATAGGCTTCCTTTGGGGTATCAGATGGATGCTTCTTACTACTATCTTAAACTTCGATGGAGCATACCTTGCGGACCAAATAGTGTGATCACATTCCCAGGGGCATCATGGTTGAAGCCATGGTATTGGTGGTCGTGGCCTGTCCTACCACTAGGCATCCAATGGCATGAACAACGTCGTCAAACTTTGGGGTATGGTTCTGAGATGGCTGTGATACTTATCCAATCTGCAATATATATGGGAATAATAGCAATGACGCGTTTGGCAAGGCCAAGCCTCTCGAAGCTATGTTATAAGCGCTCTGATAAGAGCATCAACATGGTTCACAATAGCCTCAAATTAGTAGCTCTGTGGTGCATACTTGCTGCTTACACANCACCATTCTTTATCATTCCTCACACGGTTCACCCTCTACTGGGATGGATTATGTATCTGCTTGGTTCTTTTGCACTTTGCTCAATTGCAATTAATGTCTTTCTGCTACCAATGTTGCCAGTTTTGGCACTTTGGGTTGGGATTGTTGGGGTCCTGATGGTGATGGCATTTCCTTGGTATCCGAATGGGATAGTAAGAGCTCTGTCTGTCTTTGGCTATGCCTTCTGTTCTGCACCATTTTTGTGGGTATCTATGGTGAAGATTGTGGCAGGTCTTCATCTATCTCTAGAAAGGGAAGCTTTTCTGCCAAGATTTGGAGAATCTTCTCCACATTCTTGGTTTAACAAGTTATATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00064	128773	133770	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT8

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016757 transferase activity, transferring glycosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000064s00005609.1	PF01501.15	Glyco_transf_8	51	271	9.90E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.581
SRR1783600	control	2.393
SRR1783602	moderate drought stress	0.776
SRR1811619	moderate drought stress	0.706

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.416
DRR006520	Root Summer glycyrrhizin high producing strain	1.543
DRR006521	Root Winter glycyrrhizin high producing strain	0.058
DRR006522	Root Winter glycyrrhizin high producing strain	0.077
DRR006523	Root Summer glycyrrhizin low producing strain	2.301
DRR006524	Root Summer glycyrrhizin low producing strain	2.129
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.258
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.370

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.983
SRR2868004	Drought Stress (root)	7.628
SRR2967015	Control (root)	4.467

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.377
SRR9715740	Leaf	0.088
SRR9715741	Leaf	0.254
SRR9715739	Root	4.693
SRR9715742	Root	4.839
SRR9715743	Root	5.661

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.969
SRR8749028	MeJA induced 9h	0.709
SRR8749029	MeJA induced 9h	2.217
SRR8749030	Uninduced	15.908
SRR8749031	Uninduced	2.039
SRR8749032	Uninduced	0.252

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.228
SRR8400027	Control - Root	6.429