Gene detail information of Glyur000064s00005594 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17350.1 | 7.00E-82 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
| NR | KHN42685.1 | 0 | hypothetical protein glysoja_018928 [Glycine soja] |
| trEMBL | tr|I1LGR9|I1LGR9_SOYBN | 5.00E-178 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G03720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00064 | 34628 | 37404 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000064s00005594.1 | PF05703.6 | Auxin_canalis | 42 | 73 | 1.00E-09 |
| Glyur000064s00005594.1 | PF05703.6 | Auxin_canalis | 104 | 262 | 5.80E-49 |
| Glyur000064s00005594.1 | PF08458.5 | PH_2 | 269 | 368 | 1.40E-39 |
| Glyur000064s00005594.2 | PF05703.6 | Auxin_canalis | 42 | 73 | 1.00E-09 |
| Glyur000064s00005594.2 | PF05703.6 | Auxin_canalis | 104 | 262 | 5.80E-49 |
| Glyur000064s00005594.2 | PF08458.5 | PH_2 | 269 | 368 | 1.40E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.565 |
| SRR1783600 | control | 15.349 |
| SRR1783602 | moderate drought stress | 21.581 |
| SRR1811619 | moderate drought stress | 21.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.582 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.578 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.576 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.187 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 43.231 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 43.232 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.294 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.115 |
| SRR2868004 | Drought Stress (root) | 4.587 |
| SRR2967015 | Control (root) | 5.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.373 |
| SRR9715740 | Leaf | 24.764 |
| SRR9715741 | Leaf | 25.288 |
| SRR9715739 | Root | 6.467 |
| SRR9715742 | Root | 28.396 |
| SRR9715743 | Root | 25.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.438 |
| SRR8749028 | MeJA induced 9h | 0.032 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.055 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.684 |
| SRR8400027 | Control - Root | 8.648 |