Gene detail information of Glyur000064s00005590 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002184736.1 | 4.17E-07 | predicted protein [Phaeodactylum tricornutum CCAP 1055/1] |
| trEMBL | tr|B7GC37|B7GC37_PHATC | 2.00E-07 | Predicted protein {ECO:0000313|EMBL:EEC43795.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00064 | 203 | 4667 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.474 |
| SRR1783600 | control | 2.600 |
| SRR1783602 | moderate drought stress | 9.509 |
| SRR1811619 | moderate drought stress | 8.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.038 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.467 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.092 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.431 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.305 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.469 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.608 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.737 |
| SRR2868004 | Drought Stress (root) | 5.947 |
| SRR2967015 | Control (root) | 6.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.556 |
| SRR9715740 | Leaf | 0.528 |
| SRR9715741 | Leaf | 0.888 |
| SRR9715739 | Root | 1.170 |
| SRR9715742 | Root | 2.996 |
| SRR9715743 | Root | 2.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.714 |
| SRR8749028 | MeJA induced 9h | 7.488 |
| SRR8749029 | MeJA induced 9h | 4.041 |
| SRR8749030 | Uninduced | 7.794 |
| SRR8749031 | Uninduced | 3.355 |
| SRR8749032 | Uninduced | 4.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.311 |
| SRR8400027 | Control - Root | 4.617 |