Gene detail information of Glyur000063s00005878 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004508233.1 | 3.32E-103 | PREDICTED: uncharacterized protein LOC101503247 [Cicer arietinum] |
| trEMBL | tr|K7MME7|K7MME7_SOYBN | 3.00E-54 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G23653.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00063 | 352286 | 355367 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000063s00005878.1 | PF12874.2 | zf-met | 208 | 232 | 1.70E-08 |
| Glyur000063s00005878.1 | PF12874.2 | zf-met | 351 | 375 | 1.60E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.722 |
| SRR1783600 | control | 1.777 |
| SRR1783602 | moderate drought stress | 1.657 |
| SRR1811619 | moderate drought stress | 1.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.088 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.965 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.409 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.329 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.352 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.596 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.017 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.267 |
| SRR2868004 | Drought Stress (root) | 0.315 |
| SRR2967015 | Control (root) | 0.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.617 |
| SRR9715740 | Leaf | 0.228 |
| SRR9715741 | Leaf | 0.213 |
| SRR9715739 | Root | 0.909 |
| SRR9715742 | Root | 2.819 |
| SRR9715743 | Root | 2.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.448 |
| SRR8749028 | MeJA induced 9h | 19.206 |
| SRR8749029 | MeJA induced 9h | 21.291 |
| SRR8749030 | Uninduced | 7.940 |
| SRR8749031 | Uninduced | 7.197 |
| SRR8749032 | Uninduced | 7.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.318 |
| SRR8400027 | Control - Root | 1.264 |