Gene detail

Gene detail information of Glyur000063s00005873

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G57880.1	2.00E-87	multipolar spindle 1
NR	XP_004508234.1	0	PREDICTED: uncharacterized protein LOC101503562 [Cicer arietinum]
trEMBL	tr\|I1MT12\|I1MT12_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA17G08040.1}

Sequence

Transcript Sequence

>Glyur000063s00005873.1
ATGACAGAGAGAGTAGATGCCAGTGCGAGCGATGAATCGCTGAAGCTAGCGATAGCGATCTCGCTTCTCCGATCGAAGATTCTGAAAAACGTAAAAGAGTCTAGTGCGCTTTCTCCTTCGCAATCTGAATCTCTTCTCCGTTGGAAGCGAAAGGCTAAGGAAAGAAAGCAAGAGATTCTGAGGCTCAGAGAAGATCTGAAGGAAGCGCAAGAAGATGCCTCGCACTGCGATCTCTTCCCTGAGAGTGCTTCTTGCAAGTGTTATTTCTTCGACAATTTGGGGGAATTAAGCCCTAAGCATCATGGAAATGACTTCGACAGCAGATTCAATGACGTCCTTCGCCGCAGATTTCTAAGACAAGTGCGCTTGAAGGAAAGGAGGAGAAGAGTTGGTTCTTCATCTTCTTCAAGTCAGCAGCGGCTTTCTCTAGGTTTAACTGAGGAGGATGAAACAGAGCAGCTTAAGGCCTCTGTTGAATTTCTTGTGGAGCTGTGTGAGACTGTGTCACCTGTGGATGATTCCAAGTTTGCAAACCTGGCACATCAAGCCGTTGACTTTATATTGGACCTAGGATCGCCCCGTGGACTTAGTGGTGGTCAAACTCCACTCTCTCGTTGCATATCCGCAGCTCCTACCAATAGAGCTGCTAACACCGCTTCATTGAAGAATCTTCTACCTATGGGGAGGAACCTGGAACTTGTTGAAGGAATTATCAACATCCTAGTTACACGTTTGATTAGGCAGATGTGCTCGCACTTGTCAGAAAATGGATCTCAACACACTGGCACTAATGCACAGTTCTGTATTCAGCATTTGGTCCGTAAGCTTGGAAGTGAACACTGTATTGGTCAGCGGGCTATACTTTCAGTTTGTCAAAGAATTTTGGTGGGAGCAGAACGTTTGCTTTTCTCCGATCCTTTCGATGATGCCTTTCCTGACTTGCACGAATGTATGTTTATAATGATCCAGCTTATTGAGTTCTTGGTGGCAGATTACTTATTGGTGTGGTCAAAAGCTGAAGATTTTGACAGCATGCTCCTTGAAGATTGGGTGACGTCAATTATTCAGGCAAGAAAAGCATTAGAACTTCTGGAAAGCAGAAATGGACTATATGCGCTTTATATGGACCGTGTAATAGGTGAGTTGGCAAAACAAGTTGGCGGAGTCTCATTGCTTCAGAAGCTTAAACCGGATATTTTTAATCGCCTGTTTCGCTAAACATTTATTCAATTGTGAGTAATATGCTGATTTATGGCCCATATAGGAAAAATTGACATATGTTGAAATTGGGGTGTGGGGTGGTGATGCCTATTGCCTGGTAAGGTAATGGAACTTGAGTAAGCTAGACGTGCATTACTGGTTGGATTTGCACTTATACATGGATTCTTATAATAGCTTACGAAAACATTGAGGTTAGGATTAAGTGGCAGTCAATCCGCATTAAAGTCTACTTTTAGGTCATATATGCCTTTTTTCCATCCAACCGTTGCTTGTAGCTATGAATGGAATTATGGAAAGATTGTATTGCTGGTGCCATTTACAGTACACGAGTAATAGATTTGTGTACCAAACACA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00063	329375	332950	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.727
SRR1783600	control	0.712
SRR1783602	moderate drought stress	0.591
SRR1811619	moderate drought stress	0.610

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.780
DRR006520	Root Summer glycyrrhizin high producing strain	1.197
DRR006521	Root Winter glycyrrhizin high producing strain	0.657
DRR006522	Root Winter glycyrrhizin high producing strain	0.568
DRR006523	Root Summer glycyrrhizin low producing strain	0.934
DRR006524	Root Summer glycyrrhizin low producing strain	1.019
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.800
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.699

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.552
SRR2868004	Drought Stress (root)	2.253
SRR2967015	Control (root)	1.909

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.092
SRR9715740	Leaf	0.679
SRR9715741	Leaf	0.650
SRR9715739	Root	0.182
SRR9715742	Root	0.233
SRR9715743	Root	0.389

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.251
SRR8749028	MeJA induced 9h	0.358
SRR8749029	MeJA induced 9h	0.314
SRR8749030	Uninduced	0.289
SRR8749031	Uninduced	0.389
SRR8749032	Uninduced	0.439

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.950
SRR8400027	Control - Root	3.430