Gene detail information of Glyur000063s00005870 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02500.2 | 5.00E-14 | heat shock cognate protein 70-1 |
| NR | CDO98244.1 | 2.26E-27 | unnamed protein product [Coffea canephora] |
| Swissprot | tr|P26413|HSP70_SOYBN | 3.00E-29 | Heat shock 70 kDa protein |
| trEMBL | tr|A0A068TQP9|A0A068TQP9_COFCA | 8.00E-28 | Coffea canephora DH200=94 genomic scaffold, scaffold_2 {ECO:0000313|EMBL:CDO98244.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00063 | 313574 | 316285 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.345 |
| SRR1783600 | control | 21.890 |
| SRR1783602 | moderate drought stress | 45.550 |
| SRR1811619 | moderate drought stress | 43.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 93.995 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 99.206 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 364.657 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 340.541 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 205.188 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 202.926 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.099 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.419 |
| SRR2868004 | Drought Stress (root) | 20.477 |
| SRR2967015 | Control (root) | 21.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.429 |
| SRR9715740 | Leaf | 16.551 |
| SRR9715741 | Leaf | 15.654 |
| SRR9715739 | Root | 32.581 |
| SRR9715742 | Root | 119.407 |
| SRR9715743 | Root | 96.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.832 |
| SRR8749028 | MeJA induced 9h | 12.218 |
| SRR8749029 | MeJA induced 9h | 6.908 |
| SRR8749030 | Uninduced | 7.455 |
| SRR8749031 | Uninduced | 0.445 |
| SRR8749032 | Uninduced | 4.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.482 |
| SRR8400027 | Control - Root | 45.338 |