Gene detail information of Glyur000063s00005837 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G30490.1 | 0 | AFG1-like ATPase family protein |
| NR | XP_003518232.1 | 0 | PREDICTED: lactation elevated protein 1-like isoform X1 [Glycine max] |
| COG | YP_004694410.1 | 3.00E-84 | AFG1-family ATPase [Nitrosomonas sp. Is79A3] |
| trEMBL | tr|K7K9T8|K7K9T8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G36990.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00063 | 136728 | 141619 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000063s00005837.1 | PF03969.11 | AFG1_ATPase | 85 | 447 | 1.30E-90 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.969 |
| SRR1783600 | control | 3.040 |
| SRR1783602 | moderate drought stress | 5.131 |
| SRR1811619 | moderate drought stress | 4.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.510 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.570 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.906 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.926 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.023 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.346 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.569 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 57.780 |
| SRR2868004 | Drought Stress (root) | 68.660 |
| SRR2967015 | Control (root) | 71.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.135 |
| SRR9715740 | Leaf | 23.479 |
| SRR9715741 | Leaf | 32.885 |
| SRR9715739 | Root | 1.224 |
| SRR9715742 | Root | 6.322 |
| SRR9715743 | Root | 5.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.958 |
| SRR8749028 | MeJA induced 9h | 9.526 |
| SRR8749029 | MeJA induced 9h | 6.625 |
| SRR8749030 | Uninduced | 7.720 |
| SRR8749031 | Uninduced | 10.639 |
| SRR8749032 | Uninduced | 3.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.663 |
| SRR8400027 | Control - Root | 20.467 |