Gene detail information of Glyur000063s00005836 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23890.1 | 0 | HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase |
| NR | XP_004507776.1 | 0 | PREDICTED: 5'-nucleotidase domain-containing protein DDB_G0275467-like [Cicer arietinum] |
| COG | YP_002492482.1 | 8.00E-59 | HAD superfamily hydrolase [Anaeromyxobacter dehalogenans 2CP-1] |
| trEMBL | tr|K7MKA7|K7MKA7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G07760.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00063 | 127217 | 134180 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000063s00005836.1 | PF05761.9 | 5_nucleotid | 88 | 536 | 3.80E-155 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.934 |
| SRR1783600 | control | 3.034 |
| SRR1783602 | moderate drought stress | 1.610 |
| SRR1811619 | moderate drought stress | 1.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.458 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.507 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.756 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.685 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.601 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.125 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.355 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.402 |
| SRR2868004 | Drought Stress (root) | 4.912 |
| SRR2967015 | Control (root) | 4.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.923 |
| SRR9715740 | Leaf | 10.721 |
| SRR9715741 | Leaf | 13.201 |
| SRR9715739 | Root | 0.509 |
| SRR9715742 | Root | 2.424 |
| SRR9715743 | Root | 2.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.124 |
| SRR8749028 | MeJA induced 9h | 6.573 |
| SRR8749029 | MeJA induced 9h | 5.574 |
| SRR8749030 | Uninduced | 4.362 |
| SRR8749031 | Uninduced | 3.008 |
| SRR8749032 | Uninduced | 2.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.958 |
| SRR8400027 | Control - Root | 4.964 |