Gene detail information of Glyur000063s00005821 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G59650.1 | 1.00E-56 | mitochondrial ribosomal protein L51/S25/CI-B8 family protein |
| NR | XP_007135383.1 | 1.67E-75 | hypothetical protein PHAVU_010G124900g [Phaseolus vulgaris] |
| trEMBL | tr|V7ANY8|V7ANY8_PHAVU | 6.00E-76 | Uncharacterized protein {ECO:0000313|EMBL:ESW07377.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00063 | 26671 | 28873 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000063s00005821.1 | PF05047.11 | L51_S25_CI-B8 | 39 | 89 | 1.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.985 |
| SRR1783600 | control | 6.872 |
| SRR1783602 | moderate drought stress | 6.660 |
| SRR1811619 | moderate drought stress | 6.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.068 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.086 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.622 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.506 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.832 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.644 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.550 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.505 |
| SRR2868004 | Drought Stress (root) | 16.258 |
| SRR2967015 | Control (root) | 14.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.740 |
| SRR9715740 | Leaf | 7.529 |
| SRR9715741 | Leaf | 6.335 |
| SRR9715739 | Root | 2.914 |
| SRR9715742 | Root | 5.492 |
| SRR9715743 | Root | 6.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.697 |
| SRR8749028 | MeJA induced 9h | 10.773 |
| SRR8749029 | MeJA induced 9h | 14.429 |
| SRR8749030 | Uninduced | 7.884 |
| SRR8749031 | Uninduced | 3.626 |
| SRR8749032 | Uninduced | 3.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.663 |
| SRR8400027 | Control - Root | 20.467 |