Gene detail information of Glyur000062s00005508 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003524306.1 | 5.66E-81 | PREDICTED: proline-rich extensin-like protein EPR1-like [Glycine max] |
| trEMBL | tr|K7KR68|K7KR68_SOYBN | 2.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G32565.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 426524 | 429051 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 134.766 |
| SRR1783600 | control | 134.523 |
| SRR1783602 | moderate drought stress | 223.214 |
| SRR1811619 | moderate drought stress | 222.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.779 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.657 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.396 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.395 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.221 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 92.240 |
| SRR2868004 | Drought Stress (root) | 153.143 |
| SRR2967015 | Control (root) | 125.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.090 |
| SRR9715740 | Leaf | 2.517 |
| SRR9715741 | Leaf | 0.636 |
| SRR9715739 | Root | 15.933 |
| SRR9715742 | Root | 178.077 |
| SRR9715743 | Root | 140.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 282.423 |
| SRR8400027 | Control - Root | 410.938 |