Gene detail information of Glyur000062s00005497.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G44670.1 | 5.00E-175 | Domain of unknown function (DUF23) |
| NR | XP_004509608.1 | 0 | PREDICTED: uncharacterized protein LOC101490982 [Cicer arietinum] |
| trEMBL | tr|G7L730|G7L730_MEDTR | 0 | Glycosyltransferase family 92 protein {ECO:0000313|EMBL:AET03447.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 361320 | 363944 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT92 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000062s00005497.1 | PF01697.22 | Glyco_transf_92 | 241 | 448 | 3.10E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.345 |
| SRR1783600 | control | 5.334 |
| SRR1783602 | moderate drought stress | 2.286 |
| SRR1811619 | moderate drought stress | 2.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.034 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.859 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.115 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.096 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.683 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.125 |
| SRR2868004 | Drought Stress (root) | 7.982 |
| SRR2967015 | Control (root) | 7.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.977 |
| SRR9715740 | Leaf | 1.049 |
| SRR9715741 | Leaf | 0.933 |
| SRR9715739 | Root | 1.658 |
| SRR9715742 | Root | 1.881 |
| SRR9715743 | Root | 1.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.040 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.705 |
| SRR8400027 | Control - Root | 22.509 |