Gene detail information of Glyur000062s00005494 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G44650.1 | 9.00E-57 | |
| NR | NP_001241562.1 | 2.77E-115 | uncharacterized protein LOC100816881 [Glycine max] |
| trEMBL | tr|C6TA24|C6TA24_SOYBN | 1.00E-115 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G14720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 347504 | 352058 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.518 |
| SRR1783600 | control | 27.135 |
| SRR1783602 | moderate drought stress | 23.238 |
| SRR1811619 | moderate drought stress | 23.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.192 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.127 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.494 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.106 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.108 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.006 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 76.564 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 76.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.025 |
| SRR2868004 | Drought Stress (root) | 20.987 |
| SRR2967015 | Control (root) | 21.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 52.102 |
| SRR9715740 | Leaf | 76.895 |
| SRR9715741 | Leaf | 40.838 |
| SRR9715739 | Root | 11.110 |
| SRR9715742 | Root | 10.840 |
| SRR9715743 | Root | 10.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.349 |
| SRR8749028 | MeJA induced 9h | 13.159 |
| SRR8749029 | MeJA induced 9h | 9.730 |
| SRR8749030 | Uninduced | 6.611 |
| SRR8749031 | Uninduced | 1.838 |
| SRR8749032 | Uninduced | 3.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.117 |
| SRR8400027 | Control - Root | 30.764 |