Gene detail information of Glyur000062s00005493 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34900.1 | 1.00E-86 | Transcription factor GTE6 |
| NR | XP_004509610.1 | 0 | PREDICTED: transcription factor GTE1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q84XV2|GTE1_ARATH | 5.00E-129 | Transcription factor GTE1 |
| trEMBL | tr|K7L905|K7L905_SOYBN | 2.00E-177 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G32590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 340493 | 345247 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000062s00005493.1 | PF00439.20 | Bromodomain | 114 | 197 | 3.40E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.040 |
| SRR1783600 | control | 12.147 |
| SRR1783602 | moderate drought stress | 12.441 |
| SRR1811619 | moderate drought stress | 12.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.646 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.210 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.918 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.753 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.608 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 33.851 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.563 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.630 |
| SRR2868004 | Drought Stress (root) | 24.384 |
| SRR2967015 | Control (root) | 20.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.259 |
| SRR9715740 | Leaf | 20.264 |
| SRR9715741 | Leaf | 17.124 |
| SRR9715739 | Root | 2.557 |
| SRR9715742 | Root | 10.116 |
| SRR9715743 | Root | 9.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.506 |
| SRR8749028 | MeJA induced 9h | 8.959 |
| SRR8749029 | MeJA induced 9h | 7.079 |
| SRR8749030 | Uninduced | 6.535 |
| SRR8749031 | Uninduced | 2.970 |
| SRR8749032 | Uninduced | 2.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.253 |
| SRR8400027 | Control - Root | 26.247 |