Gene detail information of Glyur000062s00005475 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11680.1 | 5.00E-68 | |
| NR | XP_004509628.1 | 2.14E-105 | PREDICTED: uncharacterized protein LOC101497800 [Cicer arietinum] |
| trEMBL | tr|A0A072TSU7|A0A072TSU7_MEDTR | 2.00E-102 | Arabinogalactan protein {ECO:0000313|EMBL:KEH20266.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 144120 | 148064 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.240 |
| SRR1783600 | control | 43.974 |
| SRR1783602 | moderate drought stress | 37.844 |
| SRR1811619 | moderate drought stress | 36.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 57.225 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 55.873 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 55.897 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 56.048 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.225 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 53.488 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.704 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.249 |
| SRR2868004 | Drought Stress (root) | 83.569 |
| SRR2967015 | Control (root) | 58.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 52.075 |
| SRR9715740 | Leaf | 39.568 |
| SRR9715741 | Leaf | 60.461 |
| SRR9715739 | Root | 28.176 |
| SRR9715742 | Root | 47.888 |
| SRR9715743 | Root | 39.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 67.031 |
| SRR8749028 | MeJA induced 9h | 106.924 |
| SRR8749029 | MeJA induced 9h | 102.164 |
| SRR8749030 | Uninduced | 181.593 |
| SRR8749031 | Uninduced | 181.851 |
| SRR8749032 | Uninduced | 187.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 70.574 |
| SRR8400027 | Control - Root | 77.616 |