Gene detail information of Glyur000062s00005459 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13660.1 | 1.00E-27 | pinoresinol reductase 2 |
| NR | XP_007156276.1 | 2.55E-47 | hypothetical protein PHAVU_003G272900g [Phaseolus vulgaris] |
| Swissprot | tr|P52581|IFRH_LUPAL | 3.00E-35 | Isoflavone reductase homolog |
| trEMBL | tr|V7CG69|V7CG69_PHAVU | 1.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:ESW28270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 45851 | 48727 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000062s00005459.1 | PF05368.8 | NmrA | 31 | 101 | 2.60E-19 |
| Glyur000062s00005459.1 | PF05368.8 | NmrA | 132 | 186 | 3.50E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.761 |
| SRR1783600 | control | 9.716 |
| SRR1783602 | moderate drought stress | 13.434 |
| SRR1811619 | moderate drought stress | 7.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.640 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.940 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.259 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.013 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.547 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.712 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.174 |
| SRR2868004 | Drought Stress (root) | 8.671 |
| SRR2967015 | Control (root) | 7.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.004 |
| SRR9715740 | Leaf | 1.225 |
| SRR9715741 | Leaf | 3.437 |
| SRR9715739 | Root | 1.343 |
| SRR9715742 | Root | 3.901 |
| SRR9715743 | Root | 3.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.480 |
| SRR8749028 | MeJA induced 9h | 10.394 |
| SRR8749029 | MeJA induced 9h | 5.687 |
| SRR8749030 | Uninduced | 37.145 |
| SRR8749031 | Uninduced | 24.456 |
| SRR8749032 | Uninduced | 24.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.441 |
| SRR8400027 | Control - Root | 6.608 |